ENSMUSG00000006442


Mus musculus

Features
Gene ID: ENSMUSG00000006442
  
Biological name :Srm
  
Synonyms : Q64674 / spermidine synthase / Srm
  
Possible biological names infered from orthology : P19623
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: E2
Gene start: 148591503
Gene end: 148594993
  
Corresponding Affymetrix probe sets: 10510391 (MoGene1.0st)   1421260_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000006611
NCBI entrez gene - 20810     See in Manteia.
MGI - MGI:102690
RefSeq - NM_009272
RefSeq Peptide - NP_033298
swissprot - Q543H0
swissprot - Q64674
Ensembl - ENSMUSG00000006442
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 srmENSDARG00000055760Danio rerio
 SRMENSGALG00000003039Gallus gallus
 SRMENSG00000116649Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001045  Spermidine/spermine synthases
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase
 IPR030373  Polyamine biosynthesis domain, conserved site
 IPR030374  Polyamine biosynthesis domain
 IPR030668  Spermidine/spermine synthase, eukaryotes
 IPR035246  Spermidine synthase, tetramerisation domain
 IPR037163  Spermidine synthase, tetramerisation domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006595 polyamine metabolic process IEA
 biological_processGO:0006596 polyamine biosynthetic process IEA
 biological_processGO:0008295 spermidine biosynthetic process ISO
 biological_processGO:1990830 cellular response to leukemia inhibitory factor IEP
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004766 spermidine synthase activity ISO
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA


Pathways (from Reactome)
Pathway description
Metabolism of polyamines


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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