ENSMUSG00000009734


Mus musculus

Features
Gene ID: ENSMUSG00000009734
  
Biological name :Pou6f2
  
Synonyms : Pou6f2 / POU domain, class 6, transcription factor 2
  
Possible biological names infered from orthology : P78424 / POU class 6 homeobox 2
  
Species: Mus musculus
  
Chr. number: 13
Strand: -1
Band: A2
Gene start: 18121098
Gene end: 18397686
  
Corresponding Affymetrix probe sets: 10407929 (MoGene1.0st)   1457298_at (Mouse Genome 430 2.0 Array)   1458473_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000114173
Ensembl peptide - ENSMUSP00000134780
Ensembl peptide - ENSMUSP00000138840
Ensembl peptide - ENSMUSP00000139282
NCBI entrez gene - 218030     See in Manteia.
MGI - MGI:2443631
RefSeq - NM_175006
RefSeq Peptide - NP_778171
swissprot - V9GXR5
swissprot - F6ZW42
swissprot - H3BIZ0
swissprot - Q8BY13
Ensembl - ENSMUSG00000009734
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pou6f2ENSDARG00000086362Danio rerio
 POU6F2ENSGALG00000031713Gallus gallus
 P78424ENSG00000106536Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Pou6f1 / Q07916 / POU domain, class 6, transcription factor 1 / POU class 6 homeobox 1*ENSMUSG0000000973936


Protein motifs (from Interpro)
Interpro ID Name
 IPR000327  POU-specific domain
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR010982  Lambda repressor-like, DNA-binding domain superfamily
 IPR013847  POU domain
 IPR033056  POU domain, class 6, transcription factor 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007275 multicellular organism development IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Mir126atm1.1Cjku/Mir126atm1.1Cjku
Genetic Background: involves: 129/Sv * 129S1/Sv * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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