ENSMUSG00000012848


Mus musculus

Features
Gene ID: ENSMUSG00000012848
  
Biological name :Rps5
  
Synonyms : ribosomal protein S5 / Rps5
  
Possible biological names infered from orthology : P46782
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: A1
Gene start: 12922290
Gene end: 12926686
  
Corresponding Affymetrix probe sets: 10550052 (MoGene1.0st)   1416054_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000104179
Ensembl peptide - ENSMUSP00000121961
Ensembl peptide - ENSMUSP00000118798
Ensembl peptide - ENSMUSP00000004554
NCBI entrez gene - 20103     See in Manteia.
MGI - MGI:1097682
RefSeq - NM_009095
RefSeq Peptide - NP_033121
swissprot - D3Z1S8
swissprot - D3YYM6
swissprot - Q91V55
Ensembl - ENSMUSG00000012848
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rps5ENSDARG00000043453Danio rerio
 RPS5ENSG00000083845Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000235  Ribosomal protein S5/S7
 IPR005716  Ribosomal protein S5/S7, eukaryotic/archaeal
 IPR020606  Ribosomal protein S7, conserved site
 IPR023798  Ribosomal protein S7 domain
 IPR036823  Ribosomal protein S7 domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0006450 regulation of translational fidelity IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0015935 small ribosomal subunit IEA
 cellular_componentGO:0022627 cytosolic small ribosomal subunit IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003729 mRNA binding IEA
 molecular_functionGO:0003735 structural constituent of ribosome IEA


Pathways (from Reactome)
Pathway description
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr