ENSMUSG00000020424


Mus musculus

Features
Gene ID: ENSMUSG00000020424
  
Biological name :Gatsl3
  
Synonyms : Gatsl3 / GATS protein-like 3 / Q9CWQ8
  
Possible biological names infered from orthology : CASTOR1 / cytosolic arginine sensor for mTORC1 subunit 1 / Q8WTX7
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: A1
Gene start: 4218225
Gene end: 4222409
  
Corresponding Affymetrix probe sets: 10373902 (MoGene1.0st)   1452847_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000020699
NCBI entrez gene - 71962     See in Manteia.
MGI - MGI:1919212
RefSeq - NM_028022
RefSeq - XM_011243752
RefSeq Peptide - NP_082298
swissprot - Q9CWQ8
Ensembl - ENSMUSG00000020424
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 castor1ENSDARG00000107096Danio rerio
 CASTOR1ENSGALG00000007964Gallus gallus
 Q8WTX7ENSG00000239282Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8CAB8 / Gatsl2 / GATS protein-like 2 / Q8NAP1* / A6NHX0* / CASTOR3* / CASTOR2* / CASTOR family member 3* / cytosolic arginine sensor for mTORC1 subunit 2*ENSMUSG0000001594462


Protein motifs (from Interpro)
Interpro ID Name
 IPR026249  CASTOR family
 IPR027795  CASTOR, ACT domain
 IPR030415  Cytosolic arginine sensor for mTORC1 subunit 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:1903432 regulation of TORC1 signaling IEA
 biological_processGO:1903577 cellular response to L-arginine IEA
 biological_processGO:1904262 negative regulation of TORC1 signaling IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol ISS
 cellular_componentGO:0061700 GATOR2 complex IEA
 molecular_functionGO:0034618 arginine binding IEA
 molecular_functionGO:0042802 identical protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002590 increased mean corpuscular volume "greater than the average amount of space occupied by each red blood cell, calculated from the hematocrit and red cell count, in erythrocyte indices" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Folh1tm1b(KOMP)Wtsi/Folh1tm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Folh1tm1b(KOMP)Wtsi/J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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