ENSMUSG00000020561


Mus musculus

Features
Gene ID: ENSMUSG00000020561
  
Biological name :Twistnb
  
Synonyms : Q78WZ7 / twist basic helix-loop-helix transcription factor 1 neighbor / Twistnb
  
Possible biological names infered from orthology : Q3B726 / TWIST neighbor
  
Species: Mus musculus
  
Chr. number: 12
Strand: 1
Band: A3
Gene start: 33429635
Gene end: 33441392
  
Corresponding Affymetrix probe sets: 10395312 (MoGene1.0st)   1428633_at (Mouse Genome 430 2.0 Array)   1428634_at (Mouse Genome 430 2.0 Array)   1452852_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000020877
NCBI entrez gene - 28071     See in Manteia.
MGI - MGI:106292
RefSeq - NM_172253
RefSeq Peptide - NP_758457
swissprot - B2RT77
swissprot - Q78WZ7
Ensembl - ENSMUSG00000020561
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 twistnbENSDARG00000024416Danio rerio
 TWISTNBENSGALG00000010863Gallus gallus
 Q3B726ENSG00000105849Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005576  RNA polymerase Rpb7, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006360 transcription by RNA polymerase I IEA
 biological_processGO:1990830 cellular response to leukemia inhibitory factor IEP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005736 DNA-directed RNA polymerase I complex IBA
 molecular_functionGO:0001054 RNA polymerase I activity IBA
 molecular_functionGO:0003899 DNA-directed 5"-3" RNA polymerase activity IEA


Pathways (from Reactome)
Pathway description
B-WICH complex positively regulates rRNA expression
RNA Polymerase I Transcription Initiation
RNA Polymerase I Promoter Escape
RNA Polymerase I Chain Elongation
RNA Polymerase I Transcription Termination


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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