ENSMUSG00000020577


Mus musculus

Features
Gene ID: ENSMUSG00000020577
  
Biological name :Tspan13
  
Synonyms : Q9D8C2 / Tetraspanin-13 / Tspan13
  
Possible biological names infered from orthology : O95857
  
Species: Mus musculus
  
Chr. number: 12
Strand: -1
Band: A3
Gene start: 36014557
Gene end: 36042500
  
Corresponding Affymetrix probe sets: 10400023 (MoGene1.0st)   1418643_at (Mouse Genome 430 2.0 Array)   1460239_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000020896
Ensembl peptide - ENSMUSP00000152769
Ensembl peptide - ENSMUSP00000152258
NCBI entrez gene - 66109     See in Manteia.
MGI - MGI:1913359
RefSeq - NM_025359
RefSeq Peptide - NP_079635
swissprot - A0A1Y7VK38
swissprot - A0A1Y7VJ37
swissprot - Q9D8C2
Ensembl - ENSMUSG00000020577
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tspan13aENSDARG00000068883Danio rerio
 tspan13bENSDARG00000070479Danio rerio
 TSPAN13ENSGALG00000027240Gallus gallus
 O95857ENSG00000106537Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9CQ88 / Tspan31 / Tetraspanin-31 / Q12999*ENSMUSG0000000673656


Protein motifs (from Interpro)
Interpro ID Name
 IPR000301  Tetraspanin
 IPR008952  Tetraspanin, EC2 domain superfamily
 IPR018499  Tetraspanin/Peripherin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007166 cell surface receptor signaling pathway IBA
 biological_processGO:0065009 regulation of molecular function IEA
 biological_processGO:1903169 regulation of calcium ion transmembrane transport IDA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005246 calcium channel regulator activity IDA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr