ENSMUSG00000020628


Mus musculus

Features
Gene ID: ENSMUSG00000020628
  
Biological name :Trappc12
  
Synonyms : Q8K2L8 / trafficking protein particle complex 12 / Trappc12
  
Possible biological names infered from orthology : Q8WVT3
  
Species: Mus musculus
  
Chr. number: 12
Strand: -1
Band: A2
Gene start: 28690628
Gene end: 28750472
  
Corresponding Affymetrix probe sets: 10399768 (MoGene1.0st)   1427244_at (Mouse Genome 430 2.0 Array)   1440983_at (Mouse Genome 430 2.0 Array)   1441528_at (Mouse Genome 430 2.0 Array)   1459676_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000020954
Ensembl peptide - ENSMUSP00000127752
Ensembl peptide - ENSMUSP00000132009
NCBI entrez gene - 217449     See in Manteia.
MGI - MGI:2445089
RefSeq - XM_006515059
RefSeq - NM_001161410
RefSeq - NM_001161411
RefSeq - NM_178811
RefSeq - XM_006515057
RefSeq - XM_006515058
RefSeq Peptide - NP_001154882
RefSeq Peptide - NP_001154883
RefSeq Peptide - NP_848926
swissprot - Q8C0C3
swissprot - Q8K2L8
Ensembl - ENSMUSG00000020628
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trappc12ENSDARG00000060101Danio rerio
 TRAPPC12ENSGALG00000016387Gallus gallus
 Q8WVT3ENSG00000171853Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IEA
 biological_processGO:0007030 Golgi organization IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0051259 protein complex oligomerization IEA
 biological_processGO:0051310 metaphase plate congression IEA
 biological_processGO:0090234 regulation of kinetochore assembly IEA
 biological_processGO:1905342 positive regulation of protein localization to kinetochore IEA
 cellular_componentGO:0000776 kinetochore IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005793 endoplasmic reticulum-Golgi intermediate compartment IEA
 cellular_componentGO:0030008 TRAPP complex IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0004175 endopeptidase activity IBA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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