Manteia

ENSMUSG00000020739

Mus musculus

Features

Gene ID:	ENSMUSG00000020739

Biological name :	Nup85

Synonyms :	Nuclear pore complex protein Nup85 / Nup85 / Q8R480

Possible biological names infered from orthology :	nucleoporin 85 / Q9BW27

Species:	Mus musculus

Chr. number:	11
Strand:	1
Band:	E2
Gene start:	115564434
Gene end:	115583985

Corresponding Affymetrix probe sets:	10382542 (MoGene1.0st) 1416073_a_at (Mouse Genome 430 2.0 Array) 1437520_a_at (Mouse Genome 430 2.0 Array)

Cross references:	Ensembl peptide - ENSMUSP00000021085 Ensembl peptide - ENSMUSP00000116069 Ensembl peptide - ENSMUSP00000117333 NCBI entrez gene - 445007 See in Manteia. MGI - MGI:3046173 RefSeq - XM_006533671 RefSeq - NM_001002929 RefSeq - XM_006533670 RefSeq Peptide - NP_001002929 swissprot - Q8R480 swissprot - Z4YLV0 swissprot - Z4YM95 Ensembl - ENSMUSG00000020739

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Paralog prediction (from Ensembl)

Paralog name

Similarity(%)

No match

Protein motifs (from Interpro)

Interpro ID	Name
IPR011502	Nucleoporin Nup85-like

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0006406	mRNA export from nucleus	IBA
biological_process	GO:0006606	protein import into nucleus	IBA
biological_process	GO:0006935	chemotaxis	IDA
biological_process	GO:0015031	protein transport	IEA
biological_process	GO:0019221	cytokine-mediated signaling pathway	ISA
biological_process	GO:0030032	lamellipodium assembly	IDA
biological_process	GO:0045893	positive regulation of transcription, DNA-templated	IBA
biological_process	GO:0048246	macrophage chemotaxis	IDA
biological_process	GO:0051028	mRNA transport	IEA
cellular_component	GO:0000775	chromosome, centromeric region	IEA
cellular_component	GO:0000776	kinetochore	ISO
cellular_component	GO:0000777	condensed chromosome kinetochore	IEA
cellular_component	GO:0005634	nucleus	ISO
cellular_component	GO:0005643	nuclear pore	IEA
cellular_component	GO:0005694	chromosome	IEA
cellular_component	GO:0005737	cytoplasm	IEA
cellular_component	GO:0005819	spindle	IEA
cellular_component	GO:0005829	cytosol	IEA
cellular_component	GO:0005856	cytoskeleton	IEA
cellular_component	GO:0005886	plasma membrane	ISA
cellular_component	GO:0016020	membrane	IEA
cellular_component	GO:0031080	nuclear pore outer ring	IEA
cellular_component	GO:0031965	nuclear membrane	IEA
molecular_function	GO:0017056	structural constituent of nuclear pore	IBA
molecular_function	GO:0031727	CCR2 chemokine receptor binding	ISA

Pathways (from Reactome)

Pathway description

Phenotype (from MGI, Zfin or HPO)

ID	Phenotype	Definition	Genetic BG
MP:0011100	complete preweaning lethality	"death of all organisms of a given genotype in a population between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]	Show Allelic Composition: Nampt^{tm1.1(KOMP)Vlcg}/Nampt^{tm1.1(KOMP)Vlcg} Genetic Background: C57BL/6N-Nampt^{tm1.1(KOMP)Vlcg}/Ucd

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr