ENSMUSG00000021090


Mus musculus

Features
Gene ID: ENSMUSG00000021090
  
Biological name :Lrrc9
  
Synonyms : Leucine-rich repeat-containing protein 9 / Lrrc9 / Q8CDN9
  
Possible biological names infered from orthology : leucine rich repeat containing 9 / Q6ZRR7
  
Species: Mus musculus
  
Chr. number: 12
Strand: 1
Band: C3
Gene start: 72441866
Gene end: 72530750
  
Corresponding Affymetrix probe sets: 10396314 (MoGene1.0st)   1430376_at (Mouse Genome 430 2.0 Array)   1444868_at (Mouse Genome 430 2.0 Array)   1454024_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000152125
Ensembl peptide - ENSMUSP00000152689
Ensembl peptide - ENSMUSP00000124394
Ensembl peptide - ENSMUSP00000124602
NCBI entrez gene - 78257     See in Manteia.
MGI - MGI:1925507
RefSeq - XM_017315246
RefSeq - XM_006516382
RefSeq - XM_011244209
RefSeq - XM_011244210
RefSeq - XM_011244211
RefSeq - XM_011244212
RefSeq - XM_011244213
RefSeq - XM_011244214
RefSeq - NM_001142728
RefSeq - NM_001142729
RefSeq - NM_030070
RefSeq - XM_006516375
RefSeq - XM_006516377
RefSeq - XM_006516378
RefSeq - XM_006516380
RefSeq - XM_006516381
RefSeq Peptide - NP_084346
RefSeq Peptide - NP_001136200
RefSeq Peptide - NP_001136201
swissprot - A0A1Y7VLD2
swissprot - Q8CDN9
swissprot - A0A1Y7VNX5
swissprot - E9PUL2
Ensembl - ENSMUSG00000021090
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LRRC9ENSGALG00000012005Gallus gallus
 LRRC9ENSG00000131951Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Lrguk / Q9D5S7 / Leucine-rich repeat and guanylate kinase domain-containing protein / Q96M69* / leucine rich repeats and guanylate kinase domain containing*ENSMUSG0000005621510
Lrrc49 / leucine rich repeat containing 49 / Q8IUZ0*ENSMUSG0000004776610
Drc3 / Q9D5E4 / Dynein regulatory complex subunit 3 / Q9H069*ENSMUSG000000565988
Ppp1r7 / Q3UM45 / Protein phosphatase 1 regulatory subunit 7 / Q15435*ENSMUSG000000262758
Dnaaf1 / Q9D2H9 / Dynein assembly factor 1, axonemal / Q8NEP3* / dynein axonemal assembly factor 1*ENSMUSG000000318317
Lrrc23 / O35125 / Leucine-rich repeat-containing protein 23 / Q53EV4* / leucine rich repeat containing 23*ENSMUSG000000301255


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR003603  U2A"/phosphoprotein 32 family A, C-terminal
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr