ENSMUSG00000021870


Mus musculus

Features
Gene ID: ENSMUSG00000021870
  
Biological name :Slmap
  
Synonyms : Q3URD3 / Sarcolemmal membrane-associated protein / Slmap
  
Possible biological names infered from orthology : Q14BN4 / sarcolemma associated protein
  
Species: Mus musculus
  
Chr. number: 14
Strand: -1
Band: A3
Gene start: 26413168
Gene end: 26534931
  
Corresponding Affymetrix probe sets: 10418218 (MoGene1.0st)   1421215_a_at (Mouse Genome 430 2.0 Array)   1426457_at (Mouse Genome 430 2.0 Array)   1426458_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000123344
Ensembl peptide - ENSMUSP00000117816
Ensembl peptide - ENSMUSP00000123072
Ensembl peptide - ENSMUSP00000046956
Ensembl peptide - ENSMUSP00000087836
Ensembl peptide - ENSMUSP00000100021
Ensembl peptide - ENSMUSP00000107949
Ensembl peptide - ENSMUSP00000107950
Ensembl peptide - ENSMUSP00000117276
NCBI entrez gene - 83997     See in Manteia.
MGI - MGI:1933549
RefSeq - XM_017316229
RefSeq - XM_006519731
RefSeq - XM_006519732
RefSeq - XM_006519733
RefSeq - XM_006519734
RefSeq - XM_006519735
RefSeq - XM_006519736
RefSeq - XM_006519737
RefSeq - XM_006519738
RefSeq - XM_017316227
RefSeq - XM_017316228
RefSeq - NM_001310445
RefSeq - NM_032008
RefSeq - XM_006519725
RefSeq - XM_006519726
RefSeq - XM_006519727
RefSeq - XM_006519728
RefSeq - XM_006519729
RefSeq - XM_006519730
RefSeq Peptide - NP_001297374
RefSeq Peptide - NP_001334423
RefSeq Peptide - NP_114397
swissprot - H7BX64
swissprot - F6UV57
swissprot - F6WY34
swissprot - D3Z7V3
swissprot - Q3URD3
swissprot - F6YCM8
swissprot - F8WIH0
Ensembl - ENSMUSG00000021870
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slmapaENSDARG00000054458Danio rerio
 slmapbENSDARG00000020764Danio rerio
 SLMAPENSGALG00000005670Gallus gallus
 SLMAPENSG00000163681Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Ccdc136 / Mus musculus coiled-coil domain containing 136 (Ccdc136), transcript variant 4, mRNA. / Q96JN2* / coiled-coil domain containing 136*ENSMUSG0000002976914
Traf3ip3 / TRAF3 interacting protein 3 / Q9Y228*ENSMUSG0000003731813


Protein motifs (from Interpro)
Interpro ID Name
 IPR000253  Forkhead-associated (FHA) domain
 IPR001363  Proteinase inhibitor I25C, fetuin, conserved site
 IPR008984  SMAD/FHA domain superfamily
 IPR030498  Sarcolemmal membrane-associated protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006936 muscle contraction IEA
 biological_processGO:0072659 protein localization to plasma membrane ISO
 biological_processGO:1900825 regulation of membrane depolarization during cardiac muscle cell action potential ISO
 biological_processGO:1902305 regulation of sodium ion transmembrane transport ISO
 biological_processGO:1905150 regulation of voltage-gated sodium channel activity ISO
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IDA
 cellular_componentGO:0030018 Z disc IEA
 cellular_componentGO:0031430 M band IEA
 cellular_componentGO:0042383 sarcolemma IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0017048 Rho GTPase binding ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000111 cleft palate "congenital fissure of the tissues normally uniting to form the palate" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:49840]
Show

Allelic Composition: Hsp90aa1Tg(Tyr)2396BOve/Hsp90aa1Tg(Tyr)2396BOve
Genetic Background: FVB/N-Hsp90aa1Tg(Tyr)2396BOve

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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