ENSMUSG00000022696


Mus musculus

Features
Gene ID: ENSMUSG00000022696
  
Biological name :Sidt1
  
Synonyms : Q6AXF6 / SID1 transmembrane family member 1 / Sidt1
  
Possible biological names infered from orthology : Q9NXL6
  
Species: Mus musculus
  
Chr. number: 16
Strand: -1
Band: B4
Gene start: 44240180
Gene end: 44333196
  
Corresponding Affymetrix probe sets: 10439583 (MoGene1.0st)   1426550_at (Mouse Genome 430 2.0 Array)   1426551_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000116201
Ensembl peptide - ENSMUSP00000038433
Ensembl peptide - ENSMUSP00000114424
Ensembl peptide - ENSMUSP00000115372
NCBI entrez gene - 320007     See in Manteia.
MGI - MGI:2443155
RefSeq - XM_006522237
RefSeq - XM_017317034
RefSeq - NM_001159419
RefSeq - NM_198034
RefSeq Peptide - NP_001152891
RefSeq Peptide - NP_932151
swissprot - Q6AXF6
swissprot - F6YLH2
swissprot - E9Q247
Ensembl - ENSMUSG00000022696
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SIDT1ENSGALG00000014812Gallus gallus
 SIDT1ENSG00000072858Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Sidt2 / Q8CIF6 / SID1 transmembrane family member 2 / Q8NBJ9*ENSMUSG0000003490857


Protein motifs (from Interpro)
Interpro ID Name
 IPR025958  SID1 transmembrane family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 biological_processGO:0033227 dsRNA transport IEA
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003725 double-stranded RNA binding IDA
 molecular_functionGO:0051033 RNA transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002339 abnormal lymph node morphology "anomalous structure, size, or celluarity of the oval or bean shaped bodies located along the lymphatic system" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, MeSH:National Library of Medicine - Medical Subject Headings , 2003]
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Allelic Composition: Scribtm1b(NCOM)Mfgc/Scribtm1b(NCOM)Mfgc
Genetic Background: C57BL/6N-Scribtm1a(NCOM)Mfgc/Tcp

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr