ENSMUSG00000023980


Mus musculus

Features
Gene ID: ENSMUSG00000023980
  
Biological name :Taf8
  
Synonyms : Q9EQH4 / Taf8 / Transcription initiation factor TFIID subunit 8
  
Possible biological names infered from orthology : Q7Z7C8 / TATA-box binding protein associated factor 8
  
Species: Mus musculus
  
Chr. number: 17
Strand: -1
Band: C
Gene start: 47488050
Gene end: 47502287
  
Corresponding Affymetrix probe sets: 10451565 (MoGene1.0st)   1416450_at (Mouse Genome 430 2.0 Array)   1416451_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000063201
NCBI entrez gene - 63856     See in Manteia.
MGI - MGI:1926879
RefSeq - XM_006524767
RefSeq - NM_022015
RefSeq - XM_006524765
RefSeq - XM_006524766
RefSeq - XM_006524764
RefSeq Peptide - NP_071298
swissprot - Q9EQH4
Ensembl - ENSMUSG00000023980
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 taf8ENSDARG00000026806Danio rerio
 TAF8ENSGALG00000003498Gallus gallus
 TAF8ENSG00000137413Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006565  Bromodomain associated domain
 IPR009072  Histone-fold
 IPR019473  Transcription factor TFIID, subunit 8, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001833 inner cell mass cell proliferation IMP
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0045598 regulation of fat cell differentiation IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0051457 maintenance of protein location in nucleus IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005669 transcription factor TFIID complex ISO
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
RNA polymerase II transcribes snRNA genes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0004965 inner cell mass degeneration 
Show

Allelic Composition: Hsf1tm1Miv/Hsf1tm1Miv,Hsf2tm1Miv/Hsf2tm1Miv
Genetic Background: involves: 129S2/SvPas * 129X1/SvJ * C57BL/6

 MP:0011094 complete embryonic lethality before implantation "death of all organisms of a given genotype in a population between fertilization and implantation (Mus: E0 to less than E4.5)" [MGI:csmith]
Show

Allelic Composition: Hsf1tm1Miv/Hsf1tm1Miv,Hsf2tm1Miv/Hsf2tm1Miv
Genetic Background: involves: 129S2/SvPas * 129X1/SvJ * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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