ENSMUSG00000024029


Mus musculus

Features
Gene ID: ENSMUSG00000024029
  
Biological name :Tff3
  
Synonyms : Q62395 / Tff3 / Trefoil factor 3
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 17
Strand: -1
Band: A3.3
Gene start: 31125306
Gene end: 31129646
  
Corresponding Affymetrix probe sets: 10449657 (MoGene1.0st)   1417370_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000024827
NCBI entrez gene - 21786     See in Manteia.
MGI - MGI:104638
RefSeq - NM_011575
RefSeq Peptide - NP_035705
swissprot - Q62395
Ensembl - ENSMUSG00000024029
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TFF3ENSG00000160180Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Tff2 / trefoil factor 2 (spasmolytic protein 1) / Q03403* / trefoil factor 2*ENSMUSG0000002402843
Tff1 / Q08423 / trefoil factor 1 / P04155*ENSMUSG0000002403238


Protein motifs (from Interpro)
Interpro ID Name
 IPR000519  P-type trefoil domain
 IPR017957  P-type trefoil, conserved site
 IPR017994  P-type trefoil, chordata


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007586 digestion IBA
 biological_processGO:0010906 regulation of glucose metabolic process IDA
 biological_processGO:0042060 wound healing IBA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0030141 secretory granule IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000488 abnormal intestinal epithelium morphology "anomalous structure or development of the cellular avascular layer of the digestive tube passing from the stomach to the anus" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Meis1tm1Ngc/Meis1tm1Ngc
Genetic Background: involves: 129 * C57BL/6NCr

 MP:0005165 increased susceptibility to injury "greater than the normal reaction to trauma, especially that by physical means" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Meis1tm1Ngc/Meis1tm1Ngc
Genetic Background: involves: 129 * C57BL/6NCr

 MP:0008537 increased susceptibility to induced colitis "increased severity or induction threshold of colitis upon treatment of an organism with intestinal inflammation agents such as dextran sodium sulfate (DSS)" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Meis1tm1Ngc/Meis1tm1Ngc
Genetic Background: involves: 129 * C57BL/6NCr

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr