ENSMUSG00000025532


Mus musculus

Features
Gene ID: ENSMUSG00000025532
  
Biological name :Crcp
  
Synonyms : calcitonin gene-related peptide-receptor component protein / Crcp / O35427
  
Possible biological names infered from orthology : CGRP receptor component / O75575
  
Species: Mus musculus
  
Chr. number: 5
Strand: 1
Band: G1.3
Gene start: 130029290
Gene end: 130060789
  
Corresponding Affymetrix probe sets: 10526113 (MoGene1.0st)   1418249_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000026608
Ensembl peptide - ENSMUSP00000144624
Ensembl peptide - ENSMUSP00000143969
NCBI entrez gene - 12909     See in Manteia.
MGI - MGI:1100818
RefSeq - NM_007761
RefSeq Peptide - NP_031787
swissprot - A0A0J9YVE5
swissprot - A0A0J9YU23
swissprot - O35427
Ensembl - ENSMUSG00000025532
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 crcpENSDARG00000069373Danio rerio
 CRCPENSGALG00000002587Gallus gallus
 CRCPENSG00000241258Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005574  RNA polymerase subunit RPB4/RPC9
 IPR006590  RNA polymerase Rpb4/RPC9, core
 IPR010997  HRDC-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002376 immune system process IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006383 transcription by RNA polymerase III IEA
 biological_processGO:0006384 transcription initiation from RNA polymerase III promoter IBA
 biological_processGO:0007218 neuropeptide signaling pathway IDA
 biological_processGO:0044237 cellular metabolic process IEA
 biological_processGO:0045087 innate immune response IEA
 biological_processGO:0051607 defense response to virus IEA
 cellular_componentGO:0001669 acrosomal vesicle IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005666 DNA-directed RNA polymerase III complex IBA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0009360 DNA polymerase III complex IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0001056 RNA polymerase III activity IBA
 molecular_functionGO:0001635 calcitonin gene-related peptide receptor activity IDA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0003899 DNA-directed 5"-3" RNA polymerase activity IEA


Pathways (from Reactome)
Pathway description
RNA Polymerase III Transcription Initiation From Type 1 Promoter
RNA Polymerase III Transcription Initiation From Type 2 Promoter
RNA Polymerase III Transcription Initiation From Type 3 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000022476 Polr3h / Q9D2C6 / DNA-directed RNA polymerase III subunit RPC8 / Q9Y535* / RNA polymerase III subunit H*  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr