ENSMUSG00000022476


Mus musculus

Features
Gene ID: ENSMUSG00000022476
  
Biological name :Polr3h
  
Synonyms : DNA-directed RNA polymerase III subunit RPC8 / Polr3h / Q9D2C6
  
Possible biological names infered from orthology : Q9Y535 / RNA polymerase III subunit H
  
Species: Mus musculus
  
Chr. number: 15
Strand: -1
Band: E1
Gene start: 81888228
Gene end: 81926240
  
Corresponding Affymetrix probe sets: 10430783 (MoGene1.0st)   1424227_at (Mouse Genome 430 2.0 Array)   1424228_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000023113
Ensembl peptide - ENSMUSP00000155181
NCBI entrez gene - 78929     See in Manteia.
MGI - MGI:1926179
RefSeq - NM_030229
RefSeq Peptide - NP_084505
swissprot - Q9D2C6
Ensembl - ENSMUSG00000022476
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 polr3hENSDARG00000102590Danio rerio
 POLR3HENSGALG00000011947Gallus gallus
 POLR3HENSG00000100413Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004519  DNA-directed RNA polymerase, subunit E/RPC8
 IPR005576  RNA polymerase Rpb7, N-terminal
 IPR012340  Nucleic acid-binding, OB-fold
 IPR013238  RNA polymerase III, subunit Rpc25
 IPR036898  RNA polymerase Rpb7-like, N-terminal domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002376 immune system process IEA
 biological_processGO:0006139 nucleobase-containing compound metabolic process IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006383 transcription by RNA polymerase III IEA
 biological_processGO:0006384 transcription initiation from RNA polymerase III promoter IBA
 biological_processGO:0045087 innate immune response IEA
 biological_processGO:0051607 defense response to virus IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005666 DNA-directed RNA polymerase III complex IEA
 cellular_componentGO:0005813 centrosome IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0001056 RNA polymerase III activity IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003899 DNA-directed 5"-3" RNA polymerase activity IEA


Pathways (from Reactome)
Pathway description
RNA Polymerase III Transcription Initiation From Type 1 Promoter
RNA Polymerase III Transcription Initiation From Type 2 Promoter
RNA Polymerase III Transcription Initiation From Type 3 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000025532 Crcp / O35427 / calcitonin gene-related peptide-receptor component protein / O75575* / CGRP receptor component*  / complex






 

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