ENSGALG00000011947


Gallus gallus

Features
Gene ID: ENSGALG00000011947
  
Biological name :POLR3H
  
Synonyms : POLR3H / RNA polymerase III subunit H
  
Possible biological names infered from orthology : DNA-directed RNA polymerase III subunit RPC8 / Q9D2C6 / Q9Y535
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 49635292
Gene end: 49641645
  
Corresponding Affymetrix probe sets: Gga.12400.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000019462
Ensembl peptide - ENSGALP00000064401
NCBI entrez gene - 417990     See in Manteia.
RefSeq - NM_001277374
RefSeq - XM_015285093
RefSeq - XM_015285096
RefSeq Peptide - NP_001264303
swissprot - E1BV29
swissprot - A0A1L1RZW5
Ensembl - ENSGALG00000011947
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 polr3hENSDARG00000102590Danio rerio
 POLR3HENSG00000100413Homo sapiens
 Polr3hENSMUSG00000022476Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004519  DNA-directed RNA polymerase, subunit E/RPC8
 IPR005576  RNA polymerase Rpb7, N-terminal
 IPR012340  Nucleic acid-binding, OB-fold
 IPR013238  RNA polymerase III, subunit Rpc25


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006139 nucleobase-containing compound metabolic process IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006383 transcription by RNA polymerase III IEA
 biological_processGO:0006384 transcription initiation from RNA polymerase III promoter IBA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005666 DNA-directed RNA polymerase III complex IEA
 cellular_componentGO:0005813 centrosome IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0001056 RNA polymerase III activity IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003899 DNA-directed 5"-3" RNA polymerase activity IEA


Pathways (from Reactome)
Pathway description
RNA Polymerase III Transcription Initiation From Type 1 Promoter
RNA Polymerase III Transcription Initiation From Type 2 Promoter
RNA Polymerase III Transcription Initiation From Type 3 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000002587 CRCP / CGRP receptor component / O35427* / O75575* / calcitonin gene-related peptide-receptor component protein*  / complex






 

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