ENSG00000100413


Homo sapiens

Features
Gene ID: ENSG00000100413
  
Biological name :POLR3H
  
Synonyms : POLR3H / Q9Y535 / RNA polymerase III subunit H
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 22
Strand: -1
Band: q13.2
Gene start: 41525804
Gene end: 41544606
  
Corresponding Affymetrix probe sets: 225678_at (Human Genome U133 Plus 2.0 Array)   225682_s_at (Human Genome U133 Plus 2.0 Array)   232857_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000395674
Ensembl peptide - ENSP00000408083
Ensembl peptide - ENSP00000415053
Ensembl peptide - ENSP00000337627
Ensembl peptide - ENSP00000347345
Ensembl peptide - ENSP00000379761
Ensembl peptide - ENSP00000385315
NCBI entrez gene - 171568     See in Manteia.
RefSeq - XM_017028641
RefSeq - NM_001018050
RefSeq - NM_001018052
RefSeq - NM_001282884
RefSeq - NM_001282885
RefSeq - NM_138338
RefSeq - XM_011529993
RefSeq Peptide - NP_001018062
RefSeq Peptide - NP_001018060
RefSeq Peptide - NP_001269813
RefSeq Peptide - NP_001269814
RefSeq Peptide - NP_612211
swissprot - F8WDS5
swissprot - A0A024R1P3
swissprot - E7ERZ2
swissprot - Q9Y535
swissprot - F8WDV1
Ensembl - ENSG00000100413
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 polr3hENSDARG00000102590Danio rerio
 POLR3HENSGALG00000011947Gallus gallus
 Polr3hENSMUSG00000022476Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004519  DNA-directed RNA polymerase, subunit E/RPC8
 IPR005576  RNA polymerase Rpb7, N-terminal
 IPR012340  Nucleic acid-binding, OB-fold
 IPR013238  RNA polymerase III, subunit Rpc25
 IPR036898  RNA polymerase Rpb7-like, N-terminal domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002376 immune system process IEA
 biological_processGO:0006139 nucleobase-containing compound metabolic process IDA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006383 transcription by RNA polymerase III IDA
 biological_processGO:0006384 transcription initiation from RNA polymerase III promoter IBA
 biological_processGO:0032481 positive regulation of type I interferon production TAS
 biological_processGO:0045087 innate immune response IEA
 biological_processGO:0051607 defense response to virus IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005666 DNA-directed RNA polymerase III complex IDA
 cellular_componentGO:0005813 centrosome IDA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 molecular_functionGO:0001056 RNA polymerase III activity IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003899 DNA-directed 5"-3" RNA polymerase activity IDA


Pathways (from Reactome)
Pathway description
Cytosolic sensors of pathogen-associated DNA
RNA Polymerase III Chain Elongation
RNA Polymerase III Transcription Termination
RNA Polymerase III Abortive And Retractive Initiation
RNA Polymerase III Transcription Initiation From Type 1 Promoter
RNA Polymerase III Transcription Initiation From Type 2 Promoter
RNA Polymerase III Transcription Initiation From Type 3 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000241258 CRCP / O75575 / CGRP receptor component  / complex






 

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