ENSMUSG00000025762


Mus musculus

Features
Gene ID: ENSMUSG00000025762
  
Biological name :Larp1b
  
Synonyms : Larp1b
  
Possible biological names infered from orthology : La ribonucleoprotein domain family member 1B / Q659C4
  
Species: Mus musculus
  
Chr. number: 3
Strand: 1
Band: B
Gene start: 40950354
Gene end: 41040234
  
Corresponding Affymetrix probe sets: 10491835 (MoGene1.0st)   10491848 (MoGene1.0st)   10491858 (MoGene1.0st)   1432353_at (Mouse Genome 430 2.0 Array)   1451508_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000142106
Ensembl peptide - ENSMUSP00000142020
Ensembl peptide - ENSMUSP00000143244
Ensembl peptide - ENSMUSP00000026862
Ensembl peptide - ENSMUSP00000037127
Ensembl peptide - ENSMUSP00000096721
Ensembl peptide - ENSMUSP00000141487
NCBI entrez gene - 214048     See in Manteia.
MGI - MGI:1914604
RefSeq - XM_017319526
RefSeq - NM_001040399
RefSeq - XM_017319520
RefSeq - XM_017319524
RefSeq - XM_017319525
RefSeq Peptide - NP_001035489
swissprot - Q497V3
swissprot - Q9D423
swissprot - Q3TQS1
swissprot - A0A0G2JFN5
swissprot - A0A0A6YXJ7
swissprot - F6U5V1
Ensembl - ENSMUSG00000025762
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LARP1BENSGALG00000010207Gallus gallus
 LARP1BENSG00000138709Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Larp1 / Q6ZQ58 / La-related protein 1 / Q6PKG0* / La ribonucleoprotein domain family member 1*ENSMUSG0000003733147


Protein motifs (from Interpro)
Interpro ID Name
 IPR006607  Protein of unknown function DM15
 IPR006630  La-type HTH domain
 IPR036388  Winged helix-like DNA-binding domain superfamily
 IPR036390  Winged helix DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr