ENSG00000138709


Homo sapiens

Features
Gene ID: ENSG00000138709
  
Biological name :LARP1B
  
Synonyms : La ribonucleoprotein domain family member 1B / LARP1B / Q659C4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: 1
Band: q28.2
Gene start: 128061268
Gene end: 128222931
  
Corresponding Affymetrix probe sets: 1554038_at (Human Genome U133 Plus 2.0 Array)   226750_at (Human Genome U133 Plus 2.0 Array)   231011_at (Human Genome U133 Plus 2.0 Array)   231824_at (Human Genome U133 Plus 2.0 Array)   233764_s_at (Human Genome U133 Plus 2.0 Array)   242153_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000423686
Ensembl peptide - ENSP00000424383
Ensembl peptide - ENSP00000427281
Ensembl peptide - ENSP00000321997
Ensembl peptide - ENSP00000377829
Ensembl peptide - ENSP00000390395
Ensembl peptide - ENSP00000422850
NCBI entrez gene - 55132     See in Manteia.
RefSeq - XM_017008353
RefSeq - XM_017008343
RefSeq - XM_017008344
RefSeq - XM_017008345
RefSeq - XM_017008346
RefSeq - XM_017008347
RefSeq - XM_017008348
RefSeq - XM_017008349
RefSeq - XM_017008350
RefSeq - XM_017008351
RefSeq - XM_017008352
RefSeq - NM_001278604
RefSeq - NM_018078
RefSeq - NM_032239
RefSeq - NM_178043
RefSeq - XM_011532057
RefSeq - XM_011532058
RefSeq - XM_011532059
RefSeq - XM_011532060
RefSeq - XM_011532061
RefSeq - XM_011532062
RefSeq - XM_011532063
RefSeq - XM_011532064
RefSeq - XM_011532065
RefSeq - XM_011532067
RefSeq - XM_011532068
RefSeq - XM_011532069
RefSeq - XM_011532070
RefSeq - XM_011532072
RefSeq - XM_011532073
RefSeq - XM_011532075
RefSeq - XM_011532076
RefSeq - XM_011532077
RefSeq - XM_017008338
RefSeq - XM_017008339
RefSeq - XM_017008340
RefSeq - XM_017008341
RefSeq - XM_017008342
RefSeq Peptide - NP_060548
RefSeq Peptide - NP_115615
RefSeq Peptide - NP_835144
RefSeq Peptide - NP_001265533
swissprot - D6R9W6
swissprot - D6RJB0
swissprot - Q659C4
swissprot - G3V0E9
swissprot - H0Y9B4
swissprot - H0Y9K3
Ensembl - ENSG00000138709
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LARP1BENSGALG00000010207Gallus gallus
 Larp1bENSMUSG00000025762Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LARP1 / Q6PKG0 / La ribonucleoprotein domain family member 1ENSG0000015550657


Protein motifs (from Interpro)
Interpro ID Name
 IPR006607  Protein of unknown function DM15
 IPR006630  La-type HTH domain
 IPR036388  Winged helix-like DNA-binding domain superfamily
 IPR036390  Winged helix DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus HDA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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