ENSMUSG00000025782


Mus musculus

Features
Gene ID: ENSMUSG00000025782
  
Biological name :Taf3
  
Synonyms : Q5HZG4 / Taf3 / TATA-box binding protein associated factor 3
  
Possible biological names infered from orthology : Q5VWG9
  
Species: Mus musculus
  
Chr. number: 2
Strand: -1
Band: A1
Gene start: 9914552
Gene end: 10048596
  
Corresponding Affymetrix probe sets: 10479988 (MoGene1.0st)   1440187_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000026888
Ensembl peptide - ENSMUSP00000110559
Ensembl peptide - ENSMUSP00000110557
Ensembl peptide - ENSMUSP00000110556
NCBI entrez gene - 209361     See in Manteia.
MGI - MGI:2388097
RefSeq - NM_027748
RefSeq Peptide - NP_082024
swissprot - A2ASX8
swissprot - A2ASY1
swissprot - Q5HZG4
swissprot - A2ASY0
swissprot - A2ASX9
Ensembl - ENSMUSG00000025782
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 taf3ENSDARG00000045513Danio rerio
 TAF3ENSGALG00000006731Gallus gallus
 TAF3ENSG00000165632Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001965  Zinc finger, PHD-type
 IPR006565  Bromodomain associated domain
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR011989  Armadillo-like helical
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR019787  Zinc finger, PHD-finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IDA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II TAS
 biological_processGO:0006366 transcription by RNA polymerase II TAS
 biological_processGO:0043433 negative regulation of DNA-binding transcription factor activity IDA
 biological_processGO:0051457 maintenance of protein location in nucleus IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005669 transcription factor TFIID complex IEA
 cellular_componentGO:0031965 nuclear membrane IEA
 molecular_functionGO:0002039 p53 binding IPI
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
RNA Polymerase II Pre-transcription Events
Regulation of TP53 Activity through Phosphorylation
RNA Polymerase II Promoter Escape
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
RNA Polymerase II Transcription Initiation
RNA Polymerase II Transcription Initiation And Promoter Clearance


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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