ENSMUSG00000025978


Mus musculus

Features
Gene ID: ENSMUSG00000025978
  
Biological name :Rftn2
  
Synonyms : Q8CHX7 / Raftlin-2 / Rftn2
  
Possible biological names infered from orthology : Q52LD8 / raftlin family member 2
  
Species: Mus musculus
  
Chr. number: 1
Strand: -1
Band: C1.2
Gene start: 55170159
Gene end: 55226782
  
Corresponding Affymetrix probe sets: 10354741 (MoGene1.0st)   1428895_at (Mouse Genome 430 2.0 Array)   1451923_at (Mouse Genome 430 2.0 Array)   1452946_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000027121
Ensembl peptide - ENSMUSP00000110071
Ensembl peptide - ENSMUSP00000137942
NCBI entrez gene - 74013     See in Manteia.
MGI - MGI:1921263
RefSeq - XM_017312489
RefSeq - NM_028713
RefSeq - XM_011238610
RefSeq - XM_011238611
RefSeq - XM_011238612
RefSeq - XM_006496308
RefSeq - XM_006496309
RefSeq Peptide - NP_082989
swissprot - Q8CHX7
swissprot - M0QWQ1
Ensembl - ENSMUSG00000025978
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rftn2ENSDARG00000056078Danio rerio
 RFTN2ENSGALG00000036471Gallus gallus
 RFTN2ENSG00000162944Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rftn1 / Q6A0D4 / Raftlin / Q14699* / raftlin, lipid raft linker 1*ENSMUSG0000003931629


Protein motifs (from Interpro)
Interpro ID Name
 IPR028169  Raftlin family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0032596 protein transport into membrane raft IBA
 biological_processGO:0033227 dsRNA transport IMP
 biological_processGO:0043330 response to exogenous dsRNA IMP
 biological_processGO:0050851 antigen receptor-mediated signaling pathway IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0045121 membrane raft IBA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr