ENSMUSG00000026765


Mus musculus

Features
Gene ID: ENSMUSG00000026765
  
Biological name :Lypd6b
  
Synonyms : Ly6/PLAUR domain-containing protein 6B / Lypd6b / Q9D7F2
  
Possible biological names infered from orthology : LY6/PLAUR domain containing 6B / Q8NI32
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: C1.1
Gene start: 49787688
Gene end: 49948849
  
Corresponding Affymetrix probe sets: 10472022 (MoGene1.0st)   1429274_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000028103
NCBI entrez gene - 71897     See in Manteia.
MGI - MGI:1919147
RefSeq - XM_017319267
RefSeq - NM_027990
RefSeq - XM_006498358
RefSeq - XM_006498359
RefSeq - XM_006498350
RefSeq - XM_006498351
RefSeq - XM_006498352
RefSeq - XM_006498353
RefSeq - XM_006498354
RefSeq - XM_006498355
RefSeq - XM_006498356
RefSeq - XM_006498357
RefSeq Peptide - NP_082266
swissprot - Q9D7F2
Ensembl - ENSMUSG00000026765
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lypd6bENSDARG00000077643Danio rerio
 LYPD6BENSGALG00000028759Gallus gallus
 LYPD6BENSG00000150556Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Lypd6 / Q8BPP5 / Ly6/PLAUR domain-containing protein 6 / Q86Y78* / LY6/PLAUR domain containing 6*ENSMUSG0000005044734


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 biological_processGO:0099601 regulation of neurotransmitter receptor activity IEA
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031225 anchored component of membrane IEA
 molecular_functionGO:0030548 acetylcholine receptor regulator activity IEA


Pathways (from Reactome)
Pathway description
Post-translational modification: synthesis of GPI-anchored proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001415 increased exploration in new environment "greater amount of time spent investigating new location" [J:28825]
Show

Allelic Composition: Jam3tm1.1(KOMP)Vlcg/Jam3tm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Jam3tm1.1(KOMP)Vlcg/J

 MP:0001539 decreased number of caudal vertebrae "reduced number of the bony segments of the tail" [Stedman s Medical Dictionary, 27th edition:ISBN 0-683-40008-8]
Show

Allelic Composition: Jam3tm1.1(KOMP)Vlcg/Jam3tm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Jam3tm1.1(KOMP)Vlcg/J

 MP:0002727 decreased circulating insulin level "less than normal levels of insulin in the blood" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, dlb:Donna Burkart , Mouse Genome Informatics Curator]
Show

Allelic Composition: Jam3tm1.1(KOMP)Vlcg/Jam3tm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Jam3tm1.1(KOMP)Vlcg/J

 MP:0005565 increased blood urea nitrogen level "high circulating concentration of nitrogen, in the form of urea; commonly used to measure renal function" [RGD:Rat Genome Database submission, Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Jam3tm1.1(KOMP)Vlcg/Jam3tm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Jam3tm1.1(KOMP)Vlcg/J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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