ENSMUSG00000027201


Mus musculus

Features
Gene ID: ENSMUSG00000027201
  
Biological name :Myef2
  
Synonyms : Myef2 / Myelin expression factor 2 / Q8C854
  
Possible biological names infered from orthology : Q9P2K5
  
Species: Mus musculus
  
Chr. number: 2
Strand: -1
Band: F1
Gene start: 125084628
Gene end: 125123661
  
Corresponding Affymetrix probe sets: 10487033 (MoGene1.0st)   10608667 (MoGene1.0st)   1425349_a_at (Mouse Genome 430 2.0 Array)   1425350_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000115519
Ensembl peptide - ENSMUSP00000123088
Ensembl peptide - ENSMUSP00000123222
Ensembl peptide - ENSMUSP00000066312
Ensembl peptide - ENSMUSP00000087258
Ensembl peptide - ENSMUSP00000106127
Ensembl peptide - ENSMUSP00000114817
NCBI entrez gene - 17876     See in Manteia.
MGI - MGI:104592
RefSeq - XM_006498884
RefSeq - XM_017316134
RefSeq - XM_017316132
RefSeq - XM_017316131
RefSeq - NM_001162417
RefSeq - NM_001162418
RefSeq - NM_010852
RefSeq Peptide - NP_001155889
RefSeq Peptide - NP_001155890
RefSeq Peptide - NP_034982
swissprot - Q8C854
swissprot - A2ATP6
swissprot - A2ATP5
swissprot - G8JL68
swissprot - F6XJA1
Ensembl - ENSMUSG00000027201
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 myef2ENSDARG00000059398Danio rerio
 MYEF2ENSGALG00000032546Gallus gallus
 MYEF2ENSG00000104177Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gm9833 / Q8C854 / predicted gene 9833 / MYEF2* / Q9P2K5* / myelin expression factor 2*ENSMUSG0000004923074
Hnrnpm / Q9D0E1 / Heteroous nuclear ribonucleoprotein M / P52272* / heterogeneous nuclear ribonucleoprotein M*ENSMUSG0000005920853


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034630  MEF-2, RNA recognition motif 1
 IPR034631  MEF-2, RNA recognition motif 3
 IPR034632  Myelin expression factor 2
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IDA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus ISO
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IEA
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003697 single-stranded DNA binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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