ENSMUSG00000059208


Mus musculus

Features
Gene ID: ENSMUSG00000059208
  
Biological name :Hnrnpm
  
Synonyms : Heteroous nuclear ribonucleoprotein M / Hnrnpm / Q9D0E1
  
Possible biological names infered from orthology : heterogeneous nuclear ribonucleoprotein M / P52272
  
Species: Mus musculus
  
Chr. number: 17
Strand: -1
Band: B1
Gene start: 33646233
Gene end: 33686860
  
Corresponding Affymetrix probe sets: 10450006 (MoGene1.0st)   1426698_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000123580
Ensembl peptide - ENSMUSP00000110027
Ensembl peptide - ENSMUSP00000084864
Ensembl peptide - ENSMUSP00000120115
Ensembl peptide - ENSMUSP00000115787
Ensembl peptide - ENSMUSP00000116671
NCBI entrez gene - 76936     See in Manteia.
MGI - MGI:1926465
RefSeq - NM_029804
RefSeq - NM_001109913
RefSeq Peptide - NP_084080
RefSeq Peptide - NP_001103383
swissprot - Q9D0E1
swissprot - B8JK32
swissprot - B8JK33
swissprot - F6W322
swissprot - F7C9U3
swissprot - Q3THB3
Ensembl - ENSMUSG00000059208
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hnrnpmENSDARG00000061735Danio rerio
 HNRNPMENSGALG00000000377Gallus gallus
 HNRNPMENSG00000099783Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Myef2 / Q8C854 / Myelin expression factor 2 / Q9P2K5*ENSMUSG0000002720143
Gm9833 / Q8C854 / predicted gene 9833 / MYEF2* / Q9P2K5* / myelin expression factor 2*ENSMUSG0000004923035


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR024666  Heterogeneous nuclear ribonucleoprotein M, PY nuclear localisation signal
 IPR024667  Heterogeneous nuclear ribonucleoprotein M
 IPR034990  hnRNPM, RNA recognition motif 3
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000380 alternative mRNA splicing, via spliceosome ISO
 biological_processGO:0000398 mRNA splicing, via spliceosome IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005681 spliceosomal complex ISO
 cellular_componentGO:0016363 nuclear matrix ISO
 cellular_componentGO:0031012 extracellular matrix HDA
 cellular_componentGO:0042382 paraspeckles ISO
 cellular_componentGO:0071013 catalytic step 2 spliceosome ISO
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019904 protein domain specific binding ISO


Pathways (from Reactome)
Pathway description
FGFR2 alternative splicing
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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