ENSGALG00000000377


Gallus gallus

Features
Gene ID: ENSGALG00000000377
  
Biological name :HNRNPM
  
Synonyms : heterogeneous nuclear ribonucleoprotein M / HNRNPM
  
Possible biological names infered from orthology : Heteroous nuclear ribonucleoprotein M / P52272 / Q9D0E1
  
Species: Gallus gallus
  
Chr. number: 28
Strand: -1
Band:
Gene start: 496611
Gene end: 521972
  
Corresponding Affymetrix probe sets: GgaAffx.11957.1.S1_at (Chicken Array)   GgaAffx.11957.1.S1_s_at (Chicken Array)   GgaAffx.240.5.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000000509
NCBI entrez gene - 420054     See in Manteia.
RefSeq - XM_015299707
RefSeq - NM_001030932
RefSeq - XM_015299705
RefSeq - XM_015299706
RefSeq - XM_015299700
RefSeq - XM_015299701
RefSeq - XM_015299702
RefSeq - XM_015299703
RefSeq - XM_015299704
RefSeq Peptide - NP_001026103
swissprot - F7B5K7
Ensembl - ENSGALG00000000377
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hnrnpmENSDARG00000061735Danio rerio
 HNRNPMENSG00000099783Homo sapiens
 HnrnpmENSMUSG00000059208Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MYEF2 / myelin expression factor 2 / Gm9833* / Q8C854* / Q9P2K5* / predicted gene 9833*ENSGALG0000003254639


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily
 IPR024666  Heterogeneous nuclear ribonucleoprotein M, PY nuclear localisation signal
 IPR024667  Heterogeneous nuclear ribonucleoprotein M


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
FGFR2 alternative splicing
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr