ENSDARG00000061735


Danio rerio

Features
Gene ID: ENSDARG00000061735
  
Biological name :hnrnpm
  
Synonyms : heterogeneous nuclear ribonucleoprotein M / hnrnpm
  
Possible biological names infered from orthology : Heteroous nuclear ribonucleoprotein M / P52272 / Q9D0E1
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 17531020
Gene end: 17544141
  
Corresponding Affymetrix probe sets: Dr.323.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000121443
Ensembl peptide - ENSDARP00000137047
Ensembl peptide - ENSDARP00000124770
Ensembl peptide - ENSDARP00000082789
NCBI entrez gene - 555643     See in Manteia.
RefSeq - XM_005170454
swissprot - E9QEE4
swissprot - A0A0R4IS10
swissprot - F1R2E0
swissprot - F8W2D3
ZFIN ID - ZDB-GENE-030131-6898
Ensembl - ENSDARG00000061735
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HNRNPMENSGALG00000000377Gallus gallus
 HNRNPMENSG00000099783Homo sapiens
 HnrnpmENSMUSG00000059208Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
myef2 / myelin expression factor 2 / Gm9833* / Q8C854* / Q9P2K5* / predicted gene 9833*ENSDARG0000005939839


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR024667  Heterogeneous nuclear ribonucleoprotein M
 IPR034990  hnRNPM, RNA recognition motif 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
FGFR2 alternative splicing
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr