ENSG00000099783


Homo sapiens

Features
Gene ID: ENSG00000099783
  
Biological name :HNRNPM
  
Synonyms : heterogeneous nuclear ribonucleoprotein M / HNRNPM / P52272
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: 1
Band: p13.2
Gene start: 8444767
Gene end: 8489114
  
Corresponding Affymetrix probe sets: 1555843_at (Human Genome U133 Plus 2.0 Array)   1555844_s_at (Human Genome U133 Plus 2.0 Array)   200072_s_at (Human Genome U133 Plus 2.0 Array)   214918_at (Human Genome U133 Plus 2.0 Array)   230392_at (Human Genome U133 Plus 2.0 Array)   233605_x_at (Human Genome U133 Plus 2.0 Array)   234035_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000472789
Ensembl peptide - ENSP00000472599
Ensembl peptide - ENSP00000483715
Ensembl peptide - ENSP00000325376
Ensembl peptide - ENSP00000325732
Ensembl peptide - ENSP00000469681
Ensembl peptide - ENSP00000469906
Ensembl peptide - ENSP00000470017
Ensembl peptide - ENSP00000470635
Ensembl peptide - ENSP00000470932
Ensembl peptide - ENSP00000471339
Ensembl peptide - ENSP00000471530
NCBI entrez gene - 4670     See in Manteia.
OMIM - 160994
RefSeq - XM_017026832
RefSeq - XM_005272478
RefSeq - XM_005272479
RefSeq - XM_005272480
RefSeq - XM_005272481
RefSeq - XM_005272483
RefSeq - XM_017026823
RefSeq - XM_017026824
RefSeq - XM_017026825
RefSeq - XM_017026826
RefSeq - XM_017026827
RefSeq - XM_017026828
RefSeq - XM_017026829
RefSeq - XM_017026830
RefSeq - XM_017026831
RefSeq - NM_001297418
RefSeq - NM_005968
RefSeq - NM_031203
RefSeq Peptide - NP_112480
RefSeq Peptide - NP_001284347
RefSeq Peptide - NP_005959
swissprot - M0QZM1
swissprot - M0R019
swissprot - M0R0N3
swissprot - M0R0Y6
swissprot - M0QY96
swissprot - M0R2T0
swissprot - P52272
swissprot - A0A087X0X3
swissprot - M0R2I7
swissprot - M0QYL3
swissprot - M0QYQ7
Ensembl - ENSG00000099783
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hnrnpmENSDARG00000061735Danio rerio
 HNRNPMENSGALG00000000377Gallus gallus
 HnrnpmENSMUSG00000059208Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MYEF2 / Q9P2K5 / myelin expression factor 2ENSG0000010417743


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR024666  Heterogeneous nuclear ribonucleoprotein M, PY nuclear localisation signal
 IPR024667  Heterogeneous nuclear ribonucleoprotein M
 IPR034990  hnRNPM, RNA recognition motif 3
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000380 alternative mRNA splicing, via spliceosome IMP
 biological_processGO:0000398 mRNA splicing, via spliceosome IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0008543 fibroblast growth factor receptor signaling pathway TAS
 biological_processGO:0016070 RNA metabolic process TAS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005681 spliceosomal complex IDA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0016363 nuclear matrix IDA
 cellular_componentGO:0031012 extracellular matrix HDA
 cellular_componentGO:0042382 paraspeckles IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019904 protein domain specific binding IPI


Pathways (from Reactome)
Pathway description
FGFR2 alternative splicing
mRNA Splicing - Major Pathway
Processing of Capped Intron-Containing Pre-mRNA


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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