ENSMUSG00000027439


Mus musculus

Features
Gene ID: ENSMUSG00000027439
  
Biological name :Gzf1
  
Synonyms : Gzf1 / Mus musculus GDNF-inducible zinc finger protein 1 (Gzf1), transcript variant 1, mRNA. / Q4VBD9
  
Possible biological names infered from orthology : GDNF inducible zinc finger protein 1 / Q9H116
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: G3
Gene start: 148681023
Gene end: 148692949
  
Corresponding Affymetrix probe sets: 10476893 (MoGene1.0st)   1428348_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000028928
Ensembl peptide - ENSMUSP00000121799
NCBI entrez gene - 74533     See in Manteia.
MGI - MGI:1921783
RefSeq - XM_006500305
RefSeq - NM_001355689
RefSeq - NM_028986
RefSeq - XM_006500304
RefSeq Peptide - NP_083262
RefSeq Peptide - NP_001342618
swissprot - Q4VBD9
swissprot - A2ASL5
Ensembl - ENSMUSG00000027439
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hnrnpa0lENSDARG00000076380Danio rerio
 GZF1ENSGALG00000008350Gallus gallus
 GZF1ENSG00000125812Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000210  BTB/POZ domain
 IPR011333  SKP1/BTB/POZ domain superfamily
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0001658 branching involved in ureteric bud morphogenesis IMP
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0000980 RNA polymerase II distal enhancer sequence-specific DNA binding IEA
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001206 transcriptional repressor activity, RNA polymerase II distal enhancer sequence-specific binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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