ENSMUSG00000027550


Mus musculus

Features
Gene ID: ENSMUSG00000027550
  
Biological name :Lrrcc1
  
Synonyms : leucine rich repeat and coiled-coil centrosomal protein 1 / Lrrcc1
  
Possible biological names infered from orthology : Q9C099
  
Species: Mus musculus
  
Chr. number: 3
Strand: 1
Band: A1
Gene start: 14533788
Gene end: 14572658
  
Corresponding Affymetrix probe sets: 10490872 (MoGene1.0st)   1429129_at (Mouse Genome 430 2.0 Array)   1435185_at (Mouse Genome 430 2.0 Array)   1435186_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000128252
Ensembl peptide - ENSMUSP00000126592
Ensembl peptide - ENSMUSP00000128733
Ensembl peptide - ENSMUSP00000129430
Ensembl peptide - ENSMUSP00000129368
Ensembl peptide - ENSMUSP00000088875
Ensembl peptide - ENSMUSP00000104007
Ensembl peptide - ENSMUSP00000126560
NCBI entrez gene - 71710     See in Manteia.
MGI - MGI:1918960
RefSeq - XM_006530090
RefSeq - NM_001163579
RefSeq - NM_001163580
RefSeq - NM_028915
RefSeq - XM_006530089
RefSeq Peptide - NP_001157052
RefSeq Peptide - NP_001157051
RefSeq Peptide - NP_083191
swissprot - B9EI20
swissprot - E9QNC6
swissprot - E9Q8Q7
swissprot - F6QGT9
swissprot - F7ANC5
swissprot - F7ABL5
swissprot - G5E8Y2
swissprot - E9PVL4
Ensembl - ENSMUSG00000027550
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrrcc1ENSDARG00000078535Danio rerio
 LRRCC1ENSGALG00000039499Gallus gallus
 LRRCC1ENSG00000133739Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Cntrl / A2AL36 / Centriolin / Q7Z7A1*ENSMUSG0000005711019


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005813 centrosome IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001891 hydroencephaly "excessive accumulation of cerebrospinal fluid in the brain, especially the cerebral ventricles, often leading to increased brain size and other brain trauma" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, MeSH:National Library of Medicine - Medical Subject Headings, 2003]
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Allelic Composition: Leprtm1b(EUCOMM)Wtsi/Leprtm1b(EUCOMM)Wtsi
Genetic Background: C57BL/6N-Leprtm1b(EUCOMM)Wtsi/H

 MP:0001925 male infertility "inability of male to produce live offspring" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:60409]
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Allelic Composition: Leprtm1b(EUCOMM)Wtsi/Leprtm1b(EUCOMM)Wtsi
Genetic Background: C57BL/6N-Leprtm1b(EUCOMM)Wtsi/H

 MP:0002152 abnormal brain morphology "anomalous structure of or abnormal development of the brain, one of the two components of the central nervous system and the center of thought and emotion; controls coordination, bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.)" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator, http://cancerweb.ncl.ac.uk]
Show

Allelic Composition: Leprtm1b(EUCOMM)Wtsi/Leprtm1b(EUCOMM)Wtsi
Genetic Background: C57BL/6N-Leprtm1b(EUCOMM)Wtsi/H

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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