ENSMUSG00000028234


Mus musculus

Features
Gene ID: ENSMUSG00000028234
  
Biological name :Rps20
  
Synonyms : P60867 / ribosomal protein S20 / Rps20
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: A1
Gene start: 3831334
Gene end: 3835665
  
Corresponding Affymetrix probe sets: 10511325 (MoGene1.0st)   1421935_at (Mouse Genome 430 2.0 Array)   1450417_a_at (Mouse Genome 430 2.0 Array)   1456373_x_at (Mouse Genome 430 2.0 Array)   1456436_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000120528
NCBI entrez gene - 67427     See in Manteia.
MGI - MGI:1914677
RefSeq - NM_026147
RefSeq Peptide - NP_080423
swissprot - P60867
swissprot - Q5BLK2
Ensembl - ENSMUSG00000028234
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RPS20ENSGALG00000014432Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001848  Ribosomal protein S10
 IPR005729  Ribosomal protein S10, eukaryotic/archaeal
 IPR018268  Ribosomal protein S10, conserved site
 IPR027486  Ribosomal protein S10 domain
 IPR036838  Ribosomal protein S10 domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002181 cytoplasmic translation IBA
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0015935 small ribosomal subunit IEA
 cellular_componentGO:0022627 cytosolic small ribosomal subunit ISO
 cellular_componentGO:0031012 extracellular matrix ISO
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003735 structural constituent of ribosome IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000575 dark foot pads "darker color of the foot pads due to excess pigment" [cml:Cathleen M. Lutz, Mouse Genome Informatics Curator]
Show

Allelic Composition: GnaqMhdadsk10/Gnaq+
Genetic Background: C3HeB/FeJ-GnaqDsk10

 MP:0002095 abnormal skin pigmentation "variation of skin color or complexion" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: GnaqMhdadsk10/Gnaq+
Genetic Background: C3HeB/FeJ-GnaqDsk10

 MP:0011091 complete prenatal lethality "death of all organisms of a given genotype in a population between fertilization and birth (Mus: approximately E18.5)" [MGI:csmith]
Show

Allelic Composition: GnaqMhdadsk10/Gnaq+
Genetic Background: C3HeB/FeJ-GnaqDsk10

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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