ENSGALG00000014432


Gallus gallus

Features
Gene ID: ENSGALG00000014432
  
Biological name :RPS20
  
Synonyms : ribosomal protein S20 / RPS20
  
Possible biological names infered from orthology : P60866 / P60867
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 111559784
Gene end: 111562438
  
Corresponding Affymetrix probe sets: GgaAffx.20653.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000023266
Ensembl peptide - ENSGALP00000063887
NCBI entrez gene - 430990     See in Manteia.
RefSeq - XM_428540
swissprot - A0A1L1RYH5
swissprot - F1NH93
Ensembl - ENSGALG00000014432
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RPS20ENSG00000008988Homo sapiens
 Rps20ENSMUSG00000028234Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001848  Ribosomal protein S10
 IPR005729  Ribosomal protein S10, eukaryotic/archaeal
 IPR018268  Ribosomal protein S10, conserved site
 IPR027486  Ribosomal protein S10 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002181 cytoplasmic translation IBA
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0015935 small ribosomal subunit IEA
 cellular_componentGO:0022627 cytosolic small ribosomal subunit IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003735 structural constituent of ribosome IEA


Pathways (from Reactome)
Pathway description
SRP-dependent cotranslational protein targeting to membrane
Translation initiation complex formation
Formation of a pool of free 40S subunits
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr