ENSMUSG00000028582


Mus musculus

Features
Gene ID: ENSMUSG00000028582
  
Biological name :Cc2d1b
  
Synonyms : Cc2d1b / Coiled-coil and C2 domain-containing protein 1B / Q8BRN9
  
Possible biological names infered from orthology : coiled-coil and C2 domain containing 1B / Q5T0F9
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: C7
Gene start: 108619940
Gene end: 108634123
  
Corresponding Affymetrix probe sets: 10506843 (MoGene1.0st)   1433861_at (Mouse Genome 430 2.0 Array)   1457749_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000030320
Ensembl peptide - ENSMUSP00000123277
Ensembl peptide - ENSMUSP00000135399
NCBI entrez gene - 319965     See in Manteia.
MGI - MGI:2443076
RefSeq - XM_006503152
RefSeq - XM_006503154
RefSeq - NM_177045
RefSeq Peptide - NP_796019
swissprot - Q8BRN9
swissprot - H3BKI0
swissprot - F6XC25
Ensembl - ENSMUSG00000028582
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cc2d1bENSDARG00000099445Danio rerio
 CC2D1BENSGALG00000010619Gallus gallus
 CC2D1BENSG00000154222Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Cc2d1a / Q8K1A6 / Coiled-coil and C2 domain-containing protein 1A / Q6P1N0* / coiled-coil and C2 domain containing 1A*ENSMUSG0000003668642


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR006608  Domain of unknown function DM14
 IPR035892  C2 domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IDA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000198 hypophosphatemia "abnormally low concentrations of phosphates in the circulating blood" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
Show

Allelic Composition: Cap2tm1a(EUCOMM)Wtsi/Cap2tm1a(EUCOMM)Wtsi
Genetic Background: C57BL/6N-Cap2tm1a(EUCOMM)Wtsi/Ieg

 MP:0001262 decreased body weight "lower than normal average weight " [J:61295]
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Allelic Composition: Cap2tm1a(EUCOMM)Wtsi/Cap2tm1a(EUCOMM)Wtsi
Genetic Background: C57BL/6N-Cap2tm1a(EUCOMM)Wtsi/Ieg

 MP:0002702 decreased circulating free fatty acid level "lower than normal levels of unesterified fatty acids in the blood" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Asxl1tm1a(EUCOMM)Wtsi/Asxl1+
Genetic Background: B6Dnk;B6Brd;B6N-Asxl1tm1a(EUCOMM)Wtsi Tyrc-Brd/WtsiH

Allelic Composition: Cc2d1btm1a(KOMP)Wtsi/Cc2d1b+
Genetic Background: Not Specified

 MP:0004924 abnormal behavior "anomalies in the actions, reactions, or performance of an organism in response to external or internal stimuli compared to controls" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Asxl1tm1a(EUCOMM)Wtsi/Asxl1+
Genetic Background: B6Dnk;B6Brd;B6N-Asxl1tm1a(EUCOMM)Wtsi Tyrc-Brd/WtsiH

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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