ENSMUSG00000028741


Mus musculus

Features
Gene ID: ENSMUSG00000028741
  
Biological name :Mrto4
  
Synonyms : Mrto4 / Mus musculus mRNA turnover 4, ribosome maturation factor (Mrto4), transcript variant 3, mRNA. / Q9D0I8
  
Possible biological names infered from orthology : MRT4 homolog, ribosome maturation factor / Q9UKD2
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: D3
Gene start: 139347435
Gene end: 139352576
  
Corresponding Affymetrix probe sets: 10399636 (MoGene1.0st)   10517706 (MoGene1.0st)   1423823_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000099561
Ensembl peptide - ENSMUSP00000121453
Ensembl peptide - ENSMUSP00000030513
NCBI entrez gene - 69902     See in Manteia.
MGI - MGI:1917152
RefSeq - XM_006539162
RefSeq - NM_001290810
RefSeq - NM_001356476
RefSeq - NM_023536
RefSeq Peptide - NP_001343405
RefSeq Peptide - NP_001277739
RefSeq Peptide - NP_076025
swissprot - Q9D0I8
swissprot - D6RCI7
swissprot - A2AMU9
swissprot - A2AMV1
Ensembl - ENSMUSG00000028741
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mrto4ENSDARG00000007130Danio rerio
 MRTO4ENSGALG00000003991Gallus gallus
 MRTO4ENSG00000053372Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001790  Ribosomal protein L10P
 IPR033867  Ribosome assembly factor Mrt4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000027 ribosomal large subunit assembly IEA
 biological_processGO:0000956 nuclear-transcribed mRNA catabolic process IBA
 biological_processGO:0006364 rRNA processing IBA
 biological_processGO:0042254 ribosome biogenesis IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr