ENSMUSG00000028830


Mus musculus

Features
Gene ID: ENSMUSG00000028830
  
Biological name :AU040320
  
Synonyms : AU040320 / Dyslexia-associated protein KIAA0319-like protein / Q8K135
  
Possible biological names infered from orthology : KIAA0319L / KIAA0319 like / Q8IZA0
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: D2.2
Gene start: 126753544
Gene end: 126870070
  
Corresponding Affymetrix probe sets: 10508190 (MoGene1.0st)   1426699_at (Mouse Genome 430 2.0 Array)   1452150_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000117842
Ensembl peptide - ENSMUSP00000099668
Ensembl peptide - ENSMUSP00000119146
Ensembl peptide - ENSMUSP00000122352
Ensembl peptide - ENSMUSP00000037802
Ensembl peptide - ENSMUSP00000099667
NCBI entrez gene - 100317     See in Manteia.
MGI - MGI:2140475
RefSeq - NM_001035526
RefSeq - NM_001035525
RefSeq - NM_133886
RefSeq - XM_017319894
RefSeq - XM_017319895
RefSeq - XM_017319896
RefSeq - XM_017319897
RefSeq - XM_017319898
RefSeq - XM_017319899
RefSeq Peptide - NP_001030602
RefSeq Peptide - NP_001030603
RefSeq Peptide - NP_598647
swissprot - A2A786
swissprot - A2A788
swissprot - Z4YK56
swissprot - A2A787
swissprot - Q8K135
Ensembl - ENSMUSG00000028830
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-193k19.1ENSDARG00000035660Danio rerio
 KIAA0319LENSGALG00000002445Gallus gallus
 Q8IZA0ENSG00000142687Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q5SZV5 / D130043K22Rik / Dyslexia-associated / Q5VV43* / KIAA0319*ENSMUSG0000000671142
Lrp11 / Q8CB67 / Low-density lipoprotein receptor-related protein 11 / Q86VZ4* / LDL receptor related protein 11*ENSMUSG000000197966


Protein motifs (from Interpro)
Interpro ID Name
 IPR000601  PKD domain
 IPR013783  Immunoglobulin-like fold
 IPR013980  MANSC domain
 IPR022409  PKD/Chitinase domain
 IPR029865  Dyslexia-associated protein KIAA0319-like protein
 IPR035986  PKD domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle ISO
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002410 decreased susceptibility to viral infection "reduced likelihood that an organism will develop ill effects from a viral infection or from components of or toxins produced by a virus " [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Nptnpitch/Nptnpitch
Genetic Background: involves: C3H * C57BL/6J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr