ENSMUSG00000028889


Mus musculus

Features
Gene ID: ENSMUSG00000028889
  
Biological name :Yrdc
  
Synonyms : Q3U5F4 / Yrdc / yrdC domain containing (E.coli)
  
Possible biological names infered from orthology : Q86U90 / yrdC N6-threonylcarbamoyltransferase domain containing
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: D2.2
Gene start: 124850679
Gene end: 124855242
  
Corresponding Affymetrix probe sets: 10507976 (MoGene1.0st)   1434744_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000099688
Ensembl peptide - ENSMUSP00000114150
NCBI entrez gene - 230734     See in Manteia.
MGI - MGI:2387201
RefSeq - NM_153566
RefSeq Peptide - NP_705794
swissprot - G8JL83
swissprot - Q3U5F4
Ensembl - ENSMUSG00000028889
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 yrdcENSDARG00000041428Danio rerio
 YRDCENSGALG00000029001Gallus gallus
 YRDCENSG00000196449Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006070  YrdC-like domain
 IPR017945  DHBP synthase RibB-like alpha/beta domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002949 tRNA threonylcarbamoyladenosine modification IBA
 biological_processGO:0006450 regulation of translational fidelity IBA
 biological_processGO:0051051 negative regulation of transport ISO
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0016020 membrane IDA
 molecular_functionGO:0000049 tRNA binding IBA
 molecular_functionGO:0003725 double-stranded RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016779 nucleotidyltransferase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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