ENSMUSG00000029028


Mus musculus

Features
Gene ID: ENSMUSG00000029028
  
Biological name :Lrrc47
  
Synonyms : Leucine-rich repeat-containing protein 47 / Lrrc47 / Q505F5
  
Possible biological names infered from orthology : leucine rich repeat containing 47 / Q8N1G4
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: E2
Gene start: 154011731
Gene end: 154021513
  
Corresponding Affymetrix probe sets: 10510836 (MoGene1.0st)   1428451_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000126367
Ensembl peptide - ENSMUSP00000133124
Ensembl peptide - ENSMUSP00000131382
Ensembl peptide - ENSMUSP00000030894
NCBI entrez gene - 72946     See in Manteia.
MGI - MGI:1920196
RefSeq - NM_201226
RefSeq Peptide - NP_957678
swissprot - F6Z4L9
swissprot - E9PV22
swissprot - Q505F5
swissprot - B1AX98
swissprot - F6YT33
Ensembl - ENSMUSG00000029028
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrrc47ENSDARG00000053138Danio rerio
 ENSGALG00000000980Gallus gallus
 LRRC47ENSG00000130764Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Farsb / Q9WUA2 / Phenylalanine--tRNA ligase beta subunit / Q9NSD9* / phenylalanyl-tRNA synthetase beta subunit*ENSMUSG0000002624515


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR005146  B3/B4 tRNA-binding domain
 IPR020825  Phenylalanyl-tRNA synthetase, B3/B4
 IPR025875  Leucine rich repeat 4
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004826 phenylalanine-tRNA ligase activity IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr