ENSMUSG00000026245


Mus musculus

Features
Gene ID: ENSMUSG00000026245
  
Biological name :Farsb
  
Synonyms : Farsb / Phenylalanine--tRNA ligase beta subunit / Q9WUA2
  
Possible biological names infered from orthology : phenylalanyl-tRNA synthetase beta subunit / Q9NSD9
  
Species: Mus musculus
  
Chr. number: 1
Strand: -1
Band: C4
Gene start: 78417975
Gene end: 78488897
  
Corresponding Affymetrix probe sets: 10355931 (MoGene1.0st)   1423708_a_at (Mouse Genome 430 2.0 Array)   1423709_s_at (Mouse Genome 430 2.0 Array)   1430986_at (Mouse Genome 430 2.0 Array)   1435103_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000129828
Ensembl peptide - ENSMUSP00000140934
Ensembl peptide - ENSMUSP00000140001
Ensembl peptide - ENSMUSP00000139933
Ensembl peptide - ENSMUSP00000069508
NCBI entrez gene - 23874     See in Manteia.
MGI - MGI:1346035
RefSeq - NM_011811
RefSeq - NM_001278075
RefSeq Peptide - NP_001265004
RefSeq Peptide - NP_035941
swissprot - Q9WUA2
swissprot - A0A087WQ15
swissprot - A0A087WPV4
swissprot - A0A087WS80
Ensembl - ENSMUSG00000026245
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 farsbENSDARG00000016864Danio rerio
 FARSBENSGALG00000005236Gallus gallus
 FARSBENSG00000116120Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Lrrc47 / Q505F5 / Leucine-rich repeat-containing protein 47 / Q8N1G4* / leucine rich repeat containing 47*ENSMUSG0000002902815


Protein motifs (from Interpro)
Interpro ID Name
 IPR004531  Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic
 IPR005146  B3/B4 tRNA-binding domain
 IPR005147  tRNA synthetase, B5-domain
 IPR009061  Putative DNA-binding domain superfamily
 IPR020825  Phenylalanyl-tRNA synthetase, B3/B4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0006432 phenylalanyl-tRNA aminoacylation ISO
 biological_processGO:0051290 protein heterotetramerization ISS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0009328 phenylalanine-tRNA ligase complex ISO
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0000287 magnesium ion binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004812 aminoacyl-tRNA ligase activity IEA
 molecular_functionGO:0004826 phenylalanine-tRNA ligase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016874 ligase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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