ENSMUSG00000029173


Mus musculus

Features
Gene ID: ENSMUSG00000029173
  
Biological name :Sepsecs
  
Synonyms : O-phosphoseryl-tRNA(Sec) selenium transferase / Q6P6M7 / Sepsecs
  
Possible biological names infered from orthology : Q9HD40 / Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: C1
Gene start: 52640087
Gene end: 52669708
  
Corresponding Affymetrix probe sets: 10530045 (MoGene1.0st)   1435161_at (Mouse Genome 430 2.0 Array)   1435946_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000114413
Ensembl peptide - ENSMUSP00000114760
Ensembl peptide - ENSMUSP00000115477
Ensembl peptide - ENSMUSP00000031069
NCBI entrez gene - 211006     See in Manteia.
MGI - MGI:1098791
RefSeq - NM_172490
RefSeq Peptide - NP_766078
swissprot - Q6P6M7
swissprot - D6RGM2
swissprot - F6YLP3
swissprot - F6ZFG8
Ensembl - ENSMUSG00000029173
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sepsecsENSDARG00000033861Danio rerio
 SEPSECSENSGALG00000014386Gallus gallus
 Q9HD40ENSG00000109618Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008829  SepSecS/SepCysS family
 IPR015421  Pyridoxal phosphate-dependent transferase, major domain
 IPR015424  Pyridoxal phosphate-dependent transferase
 IPR019872  O-phosphoseryl-tRNA(Sec) selenium transferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001514 selenocysteine incorporation IDA
 biological_processGO:0006412 translation IEA
 biological_processGO:0097056 selenocysteinyl-tRNA(Sec) biosynthetic process IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000049 tRNA binding IDA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016785 transferase activity, transferring selenium-containing groups IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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