Manteia

ENSMUSG00000029387

Mus musculus

Features

Gene ID:	ENSMUSG00000029387

Biological name :	Gtf2h3

Synonyms :	Gtf2h3 / Q8VD76 / ral transcription factor IIH subunit 3

Possible biological names infered from orthology :	general transcription factor IIH subunit 3 / Q13889

Species:	Mus musculus

Chr. number:	5
Strand:	1
Band:	F
Gene start:	124579140
Gene end:	124597680

Corresponding Affymetrix probe sets:	10525766 (MoGene1.0st) 1454092_a_at (Mouse Genome 430 2.0 Array)

Cross references:	Ensembl peptide - ENSMUSP00000031333 NCBI entrez gene - 209357 See in Manteia. MGI - MGI:1277143 RefSeq - NM_181410 RefSeq Peptide - NP_852075 swissprot - Q3UZB8 swissprot - Q8VD76 Ensembl - ENSMUSG00000029387

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Paralog prediction (from Ensembl)

Paralog name

Similarity(%)

No match

Protein motifs (from Interpro)

Interpro ID	Name
IPR004600	TFIIH subunit Tfb4/GTF2H3

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0006281	DNA repair	IEA
biological_process	GO:0006289	nucleotide-excision repair	IBA
biological_process	GO:0006351	transcription, DNA-templated	IEA
biological_process	GO:0006355	regulation of transcription, DNA-templated	IEA
biological_process	GO:0006366	transcription by RNA polymerase II	IEA
biological_process	GO:0006412	translation	IEA
biological_process	GO:0006468	protein phosphorylation	IEA
biological_process	GO:0006974	cellular response to DNA damage stimulus	IEA
biological_process	GO:0070816	phosphorylation of RNA polymerase II C-terminal domain	IBA
cellular_component	GO:0000438	core TFIIH complex portion of holo TFIIH complex	IEA
cellular_component	GO:0000439	core TFIIH complex	IBA
cellular_component	GO:0005634	nucleus	ISO
cellular_component	GO:0005654	nucleoplasm	IEA
cellular_component	GO:0005669	transcription factor TFIID complex	IEA
cellular_component	GO:0005675	holo TFIIH complex	IEA
cellular_component	GO:0097550	transcriptional preinitiation complex	IEA
molecular_function	GO:0003684	damaged DNA binding	IBA
molecular_function	GO:0004672	protein kinase activity	IEA
molecular_function	GO:0008094	DNA-dependent ATPase activity	IEA
molecular_function	GO:0008135	translation factor activity, RNA binding	IBA
molecular_function	GO:0008353	RNA polymerase II carboxy-terminal domain kinase activity	IEA
molecular_function	GO:0046872	metal ion binding	IEA
molecular_function	GO:0047485	protein N-terminus binding	IEA

Pathways (from Reactome)

Pathway description

Formation of RNA Pol II elongation complex

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr