ENSMUSG00000030956


Mus musculus

Features
Gene ID: ENSMUSG00000030956
  
Biological name :Fam53b
  
Synonyms : Fam53b / Mus musculus family with sequence similarity 53, member B (Fam53b), transcript variant 3, mRNA. / Q8BGR5
  
Possible biological names infered from orthology : family with sequence similarity 53 member B / Q14153
  
Species: Mus musculus
  
Chr. number: 7
Strand: -1
Band: F3
Gene start: 132712082
Gene end: 132813886
  
Corresponding Affymetrix probe sets: 10568586 (MoGene1.0st)   1431173_at (Mouse Genome 430 2.0 Array)   1455428_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000101775
Ensembl peptide - ENSMUSP00000118953
Ensembl peptide - ENSMUSP00000116561
Ensembl peptide - ENSMUSP00000070763
Ensembl peptide - ENSMUSP00000095607
Ensembl peptide - ENSMUSP00000095608
Ensembl peptide - ENSMUSP00000101771
Ensembl peptide - ENSMUSP00000101772
Ensembl peptide - ENSMUSP00000101774
NCBI entrez gene - 77938     See in Manteia.
MGI - MGI:1925188
RefSeq - NM_212473
RefSeq - XM_006508345
RefSeq - NM_001347630
RefSeq - NM_175268
RefSeq Peptide - NP_001334559
RefSeq Peptide - NP_780477
RefSeq Peptide - NP_997638
swissprot - D3YXR6
swissprot - Q3TNT2
swissprot - Q3U0R8
swissprot - D3Z4V7
swissprot - Q8BGR5
Ensembl - ENSMUSG00000030956
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 F1QN48ENSDARG00000016156Danio rerio
 FAM53BENSGALG00000009718Gallus gallus
 FAM53BENSG00000189319Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
E9PV82 / Fam53a / Mus musculus family with sequence similarity 53, member A (Fam53a), transcript variant 3, mRNA. / Q6NSI3* / family with sequence similarity 53 member A*ENSMUSG0000003733929
Fam53c / Q8BXQ8 / Mus musculus family with sequence similarity 53, member C (Fam53c), transcript variant 2, mRNA. / Q9NYF3* / family with sequence similarity 53 member C*ENSMUSG0000003430026


Protein motifs (from Interpro)
Interpro ID Name
 IPR029356  Family of FAM53


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016055 Wnt signaling pathway IEA
 biological_processGO:0090263 positive regulation of canonical Wnt signaling pathway ISS
 cellular_componentGO:0005634 nucleus ISO
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002590 increased mean corpuscular volume "greater than the average amount of space occupied by each red blood cell, calculated from the hematocrit and red cell count, in erythrocyte indices" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Faddtm1e.1(KOMP)Wtsi/Faddtm1e.1(KOMP)Wtsi
Genetic Background: C57BL/6N-Faddtm1e.1(KOMP)Wtsi/Ucd

 MP:0002875 decreased erythrocyte count "reduced number of the cells in the blood that carry oxygen, red blood cells, per unit" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Faddtm1e.1(KOMP)Wtsi/Faddtm1e.1(KOMP)Wtsi
Genetic Background: C57BL/6N-Faddtm1e.1(KOMP)Wtsi/Ucd

 MP:0005561 increased mean corpuscular hemoglobin "greater than the average levels of hemoglobin contained in an erythrocyte" [RGD:Rat Genome Database submission, Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Faddtm1e.1(KOMP)Wtsi/Faddtm1e.1(KOMP)Wtsi
Genetic Background: C57BL/6N-Faddtm1e.1(KOMP)Wtsi/Ucd

 MP:0009142 decreased prepulse inhibition "decrease in the ability of a relatively mild stimulus to suppress the response to a strong, startle-eliciting stimulus" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Faddtm1e.1(KOMP)Wtsi/Faddtm1e.1(KOMP)Wtsi
Genetic Background: C57BL/6N-Faddtm1e.1(KOMP)Wtsi/Ucd

 MP:0010068 decreased red blood cell distribution width "lower than normal coefficient of variance (reference range) of the red blood cell volume for an organism" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator", NCI:C64800 "NCI Thesaurus (Code C64800)"]
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Allelic Composition: Faddtm1e.1(KOMP)Wtsi/Faddtm1e.1(KOMP)Wtsi
Genetic Background: C57BL/6N-Faddtm1e.1(KOMP)Wtsi/Ucd

 MP:0010087 increased circulating fructosamine level "increase in the concentration in the blood of total non enzymatic glycated proteins in the blood" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Faddtm1e.1(KOMP)Wtsi/Faddtm1e.1(KOMP)Wtsi
Genetic Background: C57BL/6N-Faddtm1e.1(KOMP)Wtsi/Ucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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