ENSMUSG00000031433


Mus musculus

Features
Gene ID: ENSMUSG00000031433
  
Biological name :Rbm41
  
Synonyms : Q8JZV4 / Rbm41 / RNA-binding protein 41
  
Possible biological names infered from orthology : Q96IZ5 / RNA binding motif protein 41
  
Species: Mus musculus
  
Chr. number: X
Strand: -1
Band: F1
Gene start: 139889511
Gene end: 139998595
  
Corresponding Affymetrix probe sets: 10606969 (MoGene1.0st)   1440937_at (Mouse Genome 430 2.0 Array)   1456027_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000033810
Ensembl peptide - ENSMUSP00000084662
Ensembl peptide - ENSMUSP00000108631
Ensembl peptide - ENSMUSP00000108634
NCBI entrez gene - 237073     See in Manteia.
MGI - MGI:2444923
RefSeq - XM_011247738
RefSeq - NM_001172147
RefSeq - NM_001172148
RefSeq - NM_001290630
RefSeq - NM_153586
RefSeq - XM_006528518
RefSeq - XM_006528521
RefSeq - XM_011247736
RefSeq Peptide - NP_705814
RefSeq Peptide - NP_001165618
RefSeq Peptide - NP_001165619
RefSeq Peptide - NP_001277559
swissprot - Q8JZV4
swissprot - A2AG09
Ensembl - ENSMUSG00000031433
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbm41ENSDARG00000054096Danio rerio
 RBM41ENSGALG00000004832Gallus gallus
 RBM41ENSG00000089682Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rnpc3 / Q3UZ01 / RNA-binding protein 40 / Q96LT9* / RNA binding region (RNP1, RRM) containing 3*ENSMUSG0000002798121


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IBA
 biological_processGO:0032502 developmental process IBA
 cellular_componentGO:0005689 U12-type spliceosomal complex IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0030626 U12 snRNA binding IBA
 molecular_functionGO:0097157 pre-mRNA intronic binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Oca2p-15J/Oca2p-15J
Genetic Background: C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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