ENSMUSG00000031609


Mus musculus

Features
Gene ID: ENSMUSG00000031609
  
Biological name :Sap30
  
Synonyms : Histone deacetylase complex subunit SAP30 / O88574 / Sap30
  
Possible biological names infered from orthology : O75446 / Sin3A associated protein 30
  
Species: Mus musculus
  
Chr. number: 8
Strand: -1
Band: B2
Gene start: 57482707
Gene end: 57487860
  
Corresponding Affymetrix probe sets: 10578763 (MoGene1.0st)   1417719_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000034022
NCBI entrez gene - 60406     See in Manteia.
MGI - MGI:1929129
RefSeq - NM_021788
RefSeq Peptide - NP_068560
swissprot - O88574
Ensembl - ENSMUSG00000031609
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SAP30ENSGALG00000036252Gallus gallus
 SAP30ENSG00000164105Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q5SQF8 / Sap30l / Histone deacetylase complex subunit SAP30L / Q9HAJ7* / SAP30 like*ENSMUSG0000002051956


Protein motifs (from Interpro)
Interpro ID Name
 IPR024145  Histone deacetylase complex subunit SAP30/SAP30-like
 IPR025717  Histone deacetylase complex subunit SAP30 zinc-finger
 IPR025718  Histone deacetylase complex subunit SAP30, Sin3 binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IDA
 biological_processGO:0000183 chromatin silencing at rDNA TAS
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated ISO
 biological_processGO:0016575 histone deacetylation IEA
 biological_processGO:0035914 skeletal muscle cell differentiation IMP
 cellular_componentGO:0000118 histone deacetylase complex IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0016580 Sin3 complex ISO
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003712 transcription coregulator activity IBA
 molecular_functionGO:0003714 transcription corepressor activity IEA
 molecular_functionGO:0004407 histone deacetylase activity IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
HDACs deacetylate histones


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr