ENSMUSG00000031791


Mus musculus

Features
Gene ID: ENSMUSG00000031791
  
Biological name :Tmem38a
  
Synonyms : Q3TMP8 / Tmem38a / transmembrane protein 38A
  
Possible biological names infered from orthology : Q9H6F2
  
Species: Mus musculus
  
Chr. number: 8
Strand: 1
Band: B3.3
Gene start: 72572055
Gene end: 72587282
  
Corresponding Affymetrix probe sets: 1424177_at (Mouse Genome 430 2.0 Array)   1424178_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000148844
Ensembl peptide - ENSMUSP00000034244
Ensembl peptide - ENSMUSP00000148388
NCBI entrez gene - 74166     See in Manteia.
MGI - MGI:1921416
RefSeq - XM_017312988
RefSeq - NM_144534
RefSeq - XM_006509771
RefSeq - XM_006509772
RefSeq - XM_006509773
RefSeq Peptide - NP_653117
swissprot - A0A1D5RMM9
swissprot - A0A1D5RLJ0
swissprot - Q3TMP8
Ensembl - ENSMUSG00000031791
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q6P2T0ENSDARG00000024047Danio rerio
 TMEM38AENSGALG00000003778Gallus gallus
 Q9H6F2ENSG00000072954Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9DAV9 / Tmem38b / Trimeric intracellular cation channel type B / Q9NVV0* / transmembrane protein 38B*ENSMUSG0000002842039


Protein motifs (from Interpro)
Interpro ID Name
 IPR007866  TRIC channel


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006813 potassium ion transport IEA
 biological_processGO:0015672 monovalent inorganic cation transport IEA
 biological_processGO:0034220 ion transmembrane transport IEA
 biological_processGO:0071805 potassium ion transmembrane transport IEA
 biological_processGO:0098655 cation transmembrane transport IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016529 sarcoplasmic reticulum IEA
 cellular_componentGO:0031965 nuclear membrane IEA
 cellular_componentGO:0033017 sarcoplasmic reticulum membrane IEA
 molecular_functionGO:0005261 cation channel activity IEA
 molecular_functionGO:0005267 potassium channel activity IEA
 molecular_functionGO:0015269 calcium-activated potassium channel activity TAS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002106 abnormal muscle physiology "anomolous function of the muscle, not due to an anatomical defect" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Pik3catm1Jdo/Pik3catm1Jdo
Genetic Background: B6.129S7(Cg)-Pik3catm1Jdo

 MP:0004085 abnormal heartbeat "anomaly in the appearance of regularly spaced contractions of the heart" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Pik3catm1Jdo/Pik3catm1Jdo
Genetic Background: B6.129S7(Cg)-Pik3catm1Jdo

 MP:0004215 abnormal myocardial fiber physiology "anomaly in the function of the multinucleated muscle cells of the heart" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Pik3catm1Jdo/Pik3catm1Jdo
Genetic Background: B6.129S7(Cg)-Pik3catm1Jdo

 MP:0004567 decreased myocardial fiber number "decreased number of cardiac muscle fibers, the multinucleated muscle cells of the heart" [MGI:monikat "Monika Tomczuk, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Pik3catm1Jdo/Pik3catm1Jdo
Genetic Background: B6.129S7(Cg)-Pik3catm1Jdo

 MP:0008788 abnormal fetal cardiomyocyte morphology "any structural anomaly of fetal and neonatal heart cells that undergo proliferation and are not yet terminally differentiated into binucleate or multinucleate cardiac myocytes" [PMID:17429040]
Show

Allelic Composition: Pik3catm1Jdo/Pik3catm1Jdo
Genetic Background: B6.129S7(Cg)-Pik3catm1Jdo

 MP:0011098 complete embryonic lethality during organogenesis "death of all organisms of a given genotype in a population between embryo turning and the completion of organogenesis (Mus: E9 to less than E14)" [MGI:csmith]
Show

Allelic Composition: Pik3catm1Jdo/Pik3catm1Jdo
Genetic Background: B6.129S7(Cg)-Pik3catm1Jdo

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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