ENSMUSG00000032940


Mus musculus

Features
Gene ID: ENSMUSG00000032940
  
Biological name :Rbm11
  
Synonyms : Q80YT9 / Rbm11 / Splicing regulator RBM11
  
Possible biological names infered from orthology : P57052 / RNA binding motif protein 11
  
Species: Mus musculus
  
Chr. number: 16
Strand: 1
Band: C3.1
Gene start: 75592844
Gene end: 75602829
  
Corresponding Affymetrix probe sets: 10436552 (MoGene1.0st)   1440531_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000109891
Ensembl peptide - ENSMUSP00000109887
Ensembl peptide - ENSMUSP00000038956
NCBI entrez gene - 224344     See in Manteia.
MGI - MGI:2447622
RefSeq - NM_198302
RefSeq Peptide - NP_938044
swissprot - Q80YT9
swissprot - H9KUZ7
Ensembl - ENSMUSG00000032940
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbm11ENSDARG00000090202Danio rerio
 ENSGALG00000019202Gallus gallus
 RBM11ENSG00000185272Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rbm7 / Q9CQT2 / RNA binding motif protein 7 / Q9Y580* / AP002373.1*ENSMUSG0000004239630


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034501  RBM11, RNA recognition motif
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000381 regulation of alternative mRNA splicing, via spliceosome ISO
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0034599 cellular response to oxidative stress ISO
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0016607 nuclear speck ISO
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008266 poly(U) RNA binding ISO
 molecular_functionGO:0042803 protein homodimerization activity ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr