ENSMUSG00000042396


Mus musculus

Features
Gene ID: ENSMUSG00000042396
  
Biological name :Rbm7
  
Synonyms : Q9CQT2 / Rbm7 / RNA binding motif protein 7
  
Possible biological names infered from orthology : AP002373.1 / Q9Y580
  
Species: Mus musculus
  
Chr. number: 9
Strand: -1
Band: A5.3
Gene start: 48488701
Gene end: 48495299
  
Corresponding Affymetrix probe sets: 10593213 (MoGene1.0st)   1451237_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000150767
Ensembl peptide - ENSMUSP00000126374
Ensembl peptide - ENSMUSP00000149397
NCBI entrez gene - 67010     See in Manteia.
MGI - MGI:1914260
RefSeq - NM_001326355
RefSeq - NM_001326356
RefSeq - NM_144948
RefSeq Peptide - NP_001313285
RefSeq Peptide - NP_001313284
RefSeq Peptide - NP_659197
swissprot - Q14A95
swissprot - A0A1L1SRC3
swissprot - Q9CQT2
swissprot - A0A1L1SUJ3
Ensembl - ENSMUSG00000042396
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbm7ENSDARG00000020841Danio rerio
 RBM7ENSGALG00000007017Gallus gallus
 AP002373.1ENSG00000255663Homo sapiens
 RBM7ENSG00000076053Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rbm11 / Q80YT9 / Splicing regulator RBM11 / P57052* / RNA binding motif protein 11*ENSMUSG0000003294027


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034500  RBM7, RNA recognition motif
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000381 regulation of alternative mRNA splicing, via spliceosome IBA
 biological_processGO:0051321 meiotic cell cycle IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm ISS
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003727 single-stranded RNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr