ENSMUSG00000033222


Mus musculus

Features
Gene ID: ENSMUSG00000033222
  
Biological name :Ttf2
  
Synonyms : Q5NC05 / transcription termination factor, RNA polymerase II / Ttf2
  
Possible biological names infered from orthology : Q9UNY4 / transcription termination factor 2
  
Species: Mus musculus
  
Chr. number: 3
Strand: -1
Band: F2.2
Gene start: 100938860
Gene end: 100969663
  
Corresponding Affymetrix probe sets: 10500630 (MoGene1.0st)   1428522_at (Mouse Genome 430 2.0 Array)   1452818_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000076208
Ensembl peptide - ENSMUSP00000119032
NCBI entrez gene - 74044     See in Manteia.
MGI - MGI:1921294
RefSeq - NM_001013026
RefSeq - XM_006502149
RefSeq Peptide - NP_001013044
swissprot - F6RQ10
swissprot - Q5NC05
Ensembl - ENSMUSG00000033222
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ttf2ENSDARG00000104105Danio rerio
 TTF2ENSGALG00000015249Gallus gallus
 TTF2ENSG00000116830Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000330  SNF2-related, N-terminal domain
 IPR001650  Helicase, C-terminal
 IPR002464  DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
 IPR010666  Zinc finger, GRF-type
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006353 DNA-templated transcription, termination IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008150 biological_process ND
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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