ENSMUSG00000034164


Mus musculus

Features
Gene ID: ENSMUSG00000034164
  
Biological name :Emid1
  
Synonyms : Emid1 / EMI domain-containing protein 1 / Q91VF5
  
Possible biological names infered from orthology : EMI domain containing 1 / Q96A84
  
Species: Mus musculus
  
Chr. number: 11
Strand: -1
Band: A1
Gene start: 5106265
Gene end: 5152257
  
Corresponding Affymetrix probe sets: 10383953 (MoGene1.0st)   1449581_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000131391
Ensembl peptide - ENSMUSP00000124431
Ensembl peptide - ENSMUSP00000125605
Ensembl peptide - ENSMUSP00000061704
Ensembl peptide - ENSMUSP00000117779
Ensembl peptide - ENSMUSP00000124014
NCBI entrez gene - 140703     See in Manteia.
MGI - MGI:2155091
RefSeq - XM_017314256
RefSeq - XM_006514517
RefSeq - XM_006514518
RefSeq - XM_006514521
RefSeq - XM_006514522
RefSeq - XM_006514524
RefSeq - XM_006514525
RefSeq - XM_011243663
RefSeq - NM_080595
RefSeq - XM_006514514
RefSeq - XM_006514515
RefSeq - XM_006514516
RefSeq Peptide - NP_542162
swissprot - F7BCQ7
swissprot - F6U7K9
swissprot - F6YMU2
swissprot - Q5SUT2
swissprot - Q91VF5
swissprot - E0CY77
Ensembl - ENSMUSG00000034164
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 emid1ENSDARG00000076119Danio rerio
 EMID1ENSG00000186998Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q91VF6 / Col26a1 / Mus musculus collagen, type XXVI, alpha 1 (Col26a1), transcript variant 2, mRNA. / Q96A83* / collagen type XXVI alpha 1 chain*ENSMUSG0000000441540
Q99K41 / Emilin1 / Q9Y6C2* / elastin microfibril interfacer 1*ENSMUSG0000002916325
Q8K482 / Emilin2 / Mus musculus elastin microfibril interfacer 2 (Emilin2), transcript variant 3, mRNA. / Q9BXX0* / elastin microfibril interfacer 2*ENSMUSG0000002405322
P59900 / Emilin3 / Q9NT22* / elastin microfibril interfacer 3*ENSMUSG0000005070016


Protein motifs (from Interpro)
Interpro ID Name
 IPR008160  Collagen triple helix repeat
 IPR011489  EMI domain
 IPR016133  Insect cysteine-rich antifreeze protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005581 collagen trimer IEA
 cellular_componentGO:0005783 endoplasmic reticulum IDA
 cellular_componentGO:0005794 Golgi apparatus IDA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002702 decreased circulating free fatty acid level "lower than normal levels of unesterified fatty acids in the blood" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Elmod1tm1a(EUCOMM)Hmgu/Elmod1tm1a(EUCOMM)Hmgu
Genetic Background: C57BL/6N-Elmod1tm1a(EUCOMM)Hmgu/H

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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