ENSMUSG00000034173


Mus musculus

Features
Gene ID: ENSMUSG00000034173
  
Biological name :Zbed5
  
Synonyms : Zbed5 / zinc finger, BED type containing 5
  
Possible biological names infered from orthology : Q8IZ13 / ZBED8 / zinc finger BED-type containing 8
  
Species: Mus musculus
  
Chr. number: 5
Strand: 1
Band: G1.3
Gene start: 129895723
Gene end: 129903623
  
Corresponding Affymetrix probe sets: 10503915 (MoGene1.0st)   10518453 (MoGene1.0st)   10526098 (MoGene1.0st)   10534096 (MoGene1.0st)   1429671_at (Mouse Genome 430 2.0 Array)   1450815_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000044533
Ensembl peptide - ENSMUSP00000116455
NCBI entrez gene - 71970     See in Manteia.
MGI - MGI:1919220
RefSeq - NM_183088
RefSeq - NM_001359408
RefSeq - XM_017321105
RefSeq Peptide - NP_001346337
RefSeq Peptide - NP_898911
swissprot - D3Z5B1
swissprot - B2RPU8
Ensembl - ENSMUSG00000034173
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ZBED8ENSG00000221886Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q99NI3 / Gtf2ird2 / ral transcription factor II-I repeat domain-containing protein 2 / Q6EKJ0* / Q86UP8* / GTF2IRD2B* / GTF2I repeat domain containing 2* / GTF2I repeat domain containing 2B*ENSMUSG0000001594219
Q8VEH5 / Epm2aip1 / EPM2A-interacting protein 1 / Q7L775*ENSMUSG0000004678515


Protein motifs (from Interpro)
Interpro ID Name
 IPR012337  Ribonuclease H-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005654 nucleoplasm IBA
 cellular_componentGO:0005739 mitochondrion IDA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr