ENSMUSG00000034243


Mus musculus

Features
Gene ID: ENSMUSG00000034243
  
Biological name :Golgb1
  
Synonyms : Golgb1 / golgin B1
  
Possible biological names infered from orthology : Q14789
  
Species: Mus musculus
  
Chr. number: 16
Strand: 1
Band: B3
Gene start: 36875140
Gene end: 36933085
  
Corresponding Affymetrix probe sets: 10435543 (MoGene1.0st)   1433135_at (Mouse Genome 430 2.0 Array)   1435032_at (Mouse Genome 430 2.0 Array)   1460535_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000116503
Ensembl peptide - ENSMUSP00000045239
Ensembl peptide - ENSMUSP00000110460
Ensembl peptide - ENSMUSP00000115848
Ensembl peptide - ENSMUSP00000023534
NCBI entrez gene - 224139     See in Manteia.
MGI - MGI:1099447
RefSeq - XM_017316966
RefSeq - XM_006522084
RefSeq - XM_011245881
RefSeq - XM_011245884
RefSeq - XM_017316963
RefSeq - XM_017316964
RefSeq - XM_017316965
RefSeq - NM_030035
RefSeq - XM_006522082
RefSeq - XM_006522083
RefSeq Peptide - NP_084311
swissprot - E9QAH1
swissprot - E9Q028
swissprot - E9PVZ8
swissprot - Q3U286
swissprot - Q9CTU9
Ensembl - ENSMUSG00000034243
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 golgb1ENSDARG00000061951Danio rerio
 GOLGB1ENSGALG00000041494Gallus gallus
 GOLGB1ENSG00000173230Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR026202  Golgin subfamily B member 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:1905793 protein localization to pericentriolar material ISO
 cellular_componentGO:0005793 endoplasmic reticulum-Golgi intermediate compartment ISO
 cellular_componentGO:0005794 Golgi apparatus ISO
 cellular_componentGO:0005801 cis-Golgi network IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Golgi Associated Vesicle Biogenesis
COPI-mediated anterograde transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000111 cleft palate "congenital fissure of the tissues normally uniting to form the palate" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:49840]
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Allelic Composition: Ano6tm1Avor/Ano6tm1Avor
Genetic Background: involves: 129

Allelic Composition: Golgb1m1Lanyu/Golgb1m1Lanyu
Genetic Background: A/J-Golgb1m1Lanyu

Allelic Composition: Golgb1em8Lanyu/Golgb1em8Lanyu
Genetic Background: FVB/NJ-Golgb1em8Lanyu

Allelic Composition: Golgb1em33Lanyu/Golgb1em33Lanyu
Genetic Background: FVB/NJ-Golgb1em8Lanyu

Allelic Composition: Golga5em3Lanyu/Golga5em3Lanyu,Golgb1em8Lanyu/Golgb1em8Lanyu
Genetic Background: FVB/NJ-Golga5em3Lanyu Golgb1em8Lanyu

 MP:0000428 abnormal craniofacial morphology "anomalous structure or development of the face and/or cranium" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Plaaem1Pmi/Plaatm1(NCOM)Cmhd
Genetic Background: either (involves: C57BL/6J * C57BL/6NCrl) or (involves: C57BL/6J * C57BL/6NCrl * CD1)

 MP:0000445 short snout "reduced length of the anterior facial part of the muzzle" [J:53370]
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Allelic Composition: Golga5em3Lanyu/Golga5em3Lanyu,Golgb1em8Lanyu/Golgb1em8Lanyu
Genetic Background: FVB/NJ-Golga5em3Lanyu Golgb1em8Lanyu

 MP:0000762 abnormal tongue morphology "anomalous structure or development of the mobile mass of muscular tissue and surrounding epithelial tissue occupying the cavity of the mouth and forming part of the floor" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Golgb1m1Lanyu/Golgb1m1Lanyu
Genetic Background: A/J-Golgb1m1Lanyu

Allelic Composition: Golgb1em8Lanyu/Golgb1em8Lanyu
Genetic Background: FVB/NJ-Golgb1em8Lanyu

Allelic Composition: Golgb1em33Lanyu/Golgb1em33Lanyu
Genetic Background: FVB/NJ-Golgb1em8Lanyu

 MP:0002116 abnormal craniofacial bone morphology "abnormal development of cranial or facial bones resulting in morphological abnormality" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Golga5em3Lanyu/Golga5em3Lanyu,Golgb1em8Lanyu/Golgb1em8Lanyu
Genetic Background: FVB/NJ-Golga5em3Lanyu Golgb1em8Lanyu

 MP:0009653 abnormal palate development "abnormal formation of the roof of the mouth in vertebrates formed anteriorly by a bony projection of the upper jaw (hard palate) and posteriorly by the fold of connective tissue (soft palate)" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Golgb1m1Lanyu/Golgb1m1Lanyu
Genetic Background: A/J-Golgb1m1Lanyu

Allelic Composition: Golgb1em8Lanyu/Golgb1em8Lanyu
Genetic Background: FVB/NJ-Golgb1em8Lanyu

Allelic Composition: Golgb1em33Lanyu/Golgb1em33Lanyu
Genetic Background: FVB/NJ-Golgb1em8Lanyu

 MP:0009886 failure of palatal shelf elevation "the palatal shelves fail to move from a vertical position in the orofacial cavity to a horizontal apposition above the developing tongue" [PMID:16680722]
Show

Allelic Composition: Ano6tm1Avor/Ano6tm1Avor
Genetic Background: involves: 129

Allelic Composition: Golgb1m1Lanyu/Golgb1m1Lanyu
Genetic Background: A/J-Golgb1m1Lanyu

Allelic Composition: Golgb1em8Lanyu/Golgb1em8Lanyu
Genetic Background: FVB/NJ-Golgb1em8Lanyu

Allelic Composition: Golgb1em33Lanyu/Golgb1em33Lanyu
Genetic Background: FVB/NJ-Golgb1em8Lanyu

Allelic Composition: Golgb1em8Lanyu/Golgb1em33Lanyu
Genetic Background: FVB/NJ-Golgb1em8Lanyu

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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