ENSDARG00000061951


Danio rerio

Features
Gene ID: ENSDARG00000061951
  
Biological name :golgb1
  
Synonyms : golgb1 / golgin B1
  
Possible biological names infered from orthology : Q14789
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 22312856
Gene end: 22338906
  
Corresponding Affymetrix probe sets: Dr.2275.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000122063
Ensembl peptide - ENSDARP00000152707
NCBI entrez gene - 566353     See in Manteia.
RefSeq - XM_005164908
swissprot - F1QMB4
ZFIN ID - ZDB-GENE-030429-9
Ensembl - ENSDARG00000061951
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GOLGB1ENSGALG00000041494Gallus gallus
 GOLGB1ENSG00000173230Homo sapiens
 Golgb1ENSMUSG00000034243Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-220f16.2ENSDARG000000079768


Protein motifs (from Interpro)
Interpro ID Name
 IPR026202  Golgin subfamily B member 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Golgi Associated Vesicle Biogenesis
COPI-mediated anterograde transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain edematous , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
eye size , ameliorated
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 ZFA:0000114 heart heart edematous , abnormal
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 ZFA:0000130 olfactory pit olfactory pit cilium assembly process quality , abnormal
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 ZFA:0000360 heart tube heart tube mislocalised , abnormal
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 ZFA:0001056 myotome myotome cilium assembly process quality , abnormal
myotome non-motile cilium increased length , abnormal
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 ZFA:0001094 whole organism whole organism decreased length , abnormal
whole organism length , ameliorated
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 ZFA:0001117 post-vent region post-vent region kinked , abnormal
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 ZFA:0001135 neural tube neural tube cilium assembly process quality , abnormal
neural tube has fewer parts of type neural tube cilium, abnormal
neural tube cilium increased length , abnormal
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 ZFA:0001189 vertebra vertebra decreased distance vertebra , abnormal
vertebra fused with vertebra , abnormal
vertebra mineralized , abnormal
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 ZFA:0001273 ventral mandibular arch ventral mandibular arch increased length , abnormal
ventral mandibular arch decreased width , abnormal
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 ZFA:0001655 pericardial cavity pericardial cavity bone mineralization process quality , abnormal
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 ZFA:0005619 skeletal tissue skeletal tissue tissue homeostasis disrupted , abnormal
skeletal tissue decreased amount , abnormal
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 ZFA:0009033 ependymal cell ependymal cell cilium increased length , abnormal
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 ZFA:0009358 ciliated olfactory receptor neuron ciliated olfactory receptor neuron 9+2 non-motile cilium malformed , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000042623 acbd3 / acyl-Coenzyme A binding domain containing 3 / Q9H3P7* / acyl-CoA binding domain containing 3*  / complex / reaction
 ENSDARG00000061951 golgb1 / golgin B1 / Q14789*  / complex






 

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